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13_1_20cm_3_scaffold_2855

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2855_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1..105)
DNA (105bp) protein (35aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SJB2_9FIRM
13_1_20cm_3_scaffold_2855_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(2106..3305)
DNA (1200bp) protein (400aa)
citrate (Si)-synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TP34_9CHLR
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer
13_1_20cm_3_scaffold_2855_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3342..4955)
DNA (1614bp) protein (538aa)
60 kDa chaperonin n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQF8_9CHLR
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=485913 speci
chaperonin GroEL
13_1_20cm_3_scaffold_2855_4
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4980..5564)
DNA (585bp) protein (195aa)
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:KDA41491.1}; EC=1.1.1.1 {ECO:0000313|EMBL:KDA41491.1};; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source=
UPI0003D020AF related cluster n=1 Tax=unknown RepID=UPI0003D020AF
zinc-binding alcohol dehydrogenase
13_1_20cm_3_scaffold_2855_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5549..5857)
DNA (309bp) protein (103aa)
alcohol dehydrogenase n=1 Tax=Amycolatopsis alba RepID=UPI00037D2FC5
Alcohol dehydrogenase {ECO:0000313|EMBL:EWM11437.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
adh; alcohol dehydrogenase
13_1_20cm_3_scaffold_2855_6
unknown

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comp(5854..6720)
DNA (867bp) protein (289aa)

This feature has no annotations

13_1_20cm_3_scaffold_2855_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(6717..7022)
DNA (306bp) protein (102aa)
DUF59 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL9_NITGG
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
13_1_20cm_3_scaffold_2855_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(7019..8083)
DNA (1065bp) protein (355aa)
Amidohydrolase 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C226_SPHTD rbh
Amidohydrolase 2 {ECO:0000313|EMBL:ACZ38293.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Spha
amidohydrolase 2
13_1_20cm_3_scaffold_2855_9
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8204..8593)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034AEEE6
Uncharacterized protein {ECO:0000313|EMBL:ETA00210.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
monooxygenase component MmoB/DmpM
13_1_20cm_3_scaffold_2855_10
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8590..9681)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YQR6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD66706.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
methane/phenol/toluene hydroxylase
13_1_20cm_3_scaffold_2855_11
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9789..10829)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI000346561B
Oxidoreductase FAD-binding domain protein {ECO:0000313|EMBL:ADG06262.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (str
oxidoreductase FAD-binding domain-containing protein
13_1_20cm_3_scaffold_2855_12
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11013..11927)
DNA (915bp) protein (305aa)
Methane/Phenol/Toluene Hydroxylase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X0N3_9PSEU
Methane/Phenol/Toluene Hydroxylase {ECO:0000313|EMBL:EHR50829.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora
methane monooxygenase
13_1_20cm_3_scaffold_2855_13
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11908..12570)
DNA (663bp) protein (221aa)
methane monooxygenase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003685D60
Propane monooxygenase hydroxylase large subunit {ECO:0000313|EMBL:AIJ22460.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolat
propane monooxygenase hydroxylase large subunit
13_1_20cm_3_scaffold_2855_14
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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13161..13520
DNA (360bp) protein (120aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexac
ATP-binding region ATPase domain protein n=2 Tax=Chloroflexus RepID=A9WI77_CHLAA
GAF sensor signal transduction histidine kinase
Displaying 14 items

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