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13_1_20cm_3_scaffold_3173

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3173_1
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(245..1063)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKB8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85130.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
metal-binding integral membrane protein
13_1_20cm_3_scaffold_3173_2

Not on your lists

comp(1041..1364)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN62828.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thioesterase id=14429633 bin=bin3_NC10 species=Meiothermus timidus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_20cm_3_scaffold_3173_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1405..2271)
DNA (867bp) protein (289aa)
alpha/beta hydrolase fold protein (EC:3.8.1.5)
Alpha/beta hydrolase fold protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U669_9CHLR rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EFH80480.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonoba
13_1_20cm_3_scaffold_3173_4
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2354..2488)
DNA (135bp) protein (45aa)
FAD linked oxidase, N-terminal n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q471D0_CUPPJ
FAD linked oxidase, N-terminal {ECO:0000313|EMBL:AAZ61003.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
FAD linked oxidase domain-containing protein
13_1_20cm_3_scaffold_3173_5
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2485..3702)
DNA (1218bp) protein (406aa)
6-hydroxy-D-nicotine oxidase {ECO:0000313|EMBL:AEI80562.1}; EC=1.5.3.6 {ECO:0000313|EMBL:AEI80562.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderi
oxidoreductase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0003043228
hypothetical protein
13_1_20cm_3_scaffold_3173_6
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(3927..4289)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKB8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85130.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
metal-binding integral membrane protein
13_1_20cm_3_scaffold_3173_7
unknown

Not on your lists

comp(4326..4508)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_3_scaffold_3173_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4538..5917)
DNA (1380bp) protein (460aa)
Selenium-binding protein 1 n=1 Tax=Fischerella muscicola RepID=UPI0002F83654
Selenium-binding protein {ECO:0000313|EMBL:KIJ78678.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
selenium-binding protein
13_1_20cm_3_scaffold_3173_9
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(6247..8973)
DNA (2727bp) protein (909aa)
Adenylate/guanylate cyclase with TPR repeats n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1B8_SPHTD
adenylate/guanylate cyclase with TPR repeats Tax=CG_Anaero_02
protein kinase
13_1_20cm_3_scaffold_3173_10
unknown

Not on your lists

9094..9498
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_3_scaffold_3173_11
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9325..10278)
DNA (954bp) protein (318aa)
Integrase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDE4_9CHLR rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:AHY48434.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="
Site-specific recombinase XerD
13_1_20cm_3_scaffold_3173_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(10779..11750)
DNA (972bp) protein (324aa)
Transposase IS4 family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3R6_9CHLR
Transposase IS4 family protein {ECO:0000313|EMBL:EFH83056.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacte
13_1_20cm_3_scaffold_3173_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12139..12702)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQW7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH85838.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_20cm_3_scaffold_3173_14
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12746..13600)
DNA (855bp) protein (285aa)
Short-chain alcohol dehydrogenase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KPS5_9FIRM rbh
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:AGL02570.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gib
short-chain alcohol dehydrogenase
13_1_20cm_3_scaffold_3173_15
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13629..14162)
DNA (534bp) protein (178aa)
Transcriptional regulator, TetR/AcrR family n=2 Tax=Saccharopolyspora erythraea RepID=A4FMK8_SACEN
Bacterial regulatory protein, tetR family {ECO:0000313|EMBL:AHY48133.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.
Bacterial regulatory protein, tetR family
Displaying 15 items

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