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13_1_20cm_3_scaffold_4237

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4237_1
unknown

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comp(1..120)
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_3_scaffold_4237_2
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(341..1123)
DNA (783bp) protein (261aa)
3-ketoacyl-ACP reductase n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000348F001 rbh
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KIJ75518.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
dehydrogenase
13_1_20cm_3_scaffold_4237_3
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1226..1990)
DNA (765bp) protein (255aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414, ECO:0000313|EMBL:KIL40510.1}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paeni
D-mannonate dehydratase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EAE7_THECK
D-mannonate dehydratase
13_1_20cm_3_scaffold_4237_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(1997..2194)
DNA (198bp) protein (66aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZJ0_THERP
13_1_20cm_3_scaffold_4237_5
RLO_PLX_64_10, Bacteria

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comp(2295..3047)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVB7_9FIRM
Demethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Demethylmenaquinone methyltransferase
13_1_20cm_3_scaffold_4237_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3389..3745)
DNA (357bp) protein (119aa)
Putative transposase IS891/IS1136/IS1341 family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWQ5_9CHLR
Putative transposase IS891/IS1136/IS1341 family {ECO:0000313|EMBL:EFH84638.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; K
transposase
13_1_20cm_3_scaffold_4237_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3811..4887)
DNA (1077bp) protein (359aa)
Transcriptional regulator, LacI family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0F6_9CHLR
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFH82296.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kted
LacI family transcriptional regulator
13_1_20cm_3_scaffold_4237_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(5236..5613)
DNA (378bp) protein (126aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2G7_9CHLR
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EFH82835.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Kte
carbohydrate ABC transporter substrate-binding protein
13_1_20cm_3_scaffold_4237_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(5567..6529)
DNA (963bp) protein (321aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2G7_9CHLR
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EFH82835.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Kte
solute-binding lipoprotein
13_1_20cm_3_scaffold_4237_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7169..8311
DNA (1143bp) protein (381aa)
2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2R3_THERP rbh
Isomerase {ECO:0000313|EMBL:KGM35587.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase
13_1_20cm_3_scaffold_4237_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

8435..8878
DNA (444bp) protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYC4_9CHLR
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFH83204.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;"
bleomycin resistance protein
13_1_20cm_3_scaffold_4237_12
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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9033..9686
DNA (654bp) protein (218aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (EC:4.1.2.14); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLQ5_9FIRM
13_1_20cm_3_scaffold_4237_13

Not on your lists

9686..10066
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJR1_9FIRM
Marine sediment metagenome DNA, contig: S01H4_C02524 {ECO:0000313|EMBL:GAG63342.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
PfkB domain-containing protein
13_1_20cm_3_scaffold_4237_14
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

10123..10689
DNA (567bp) protein (189aa)
ribokinase-like domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
PfkB domain protein
Putative uncharacterized protein id=2301389 bin=GWB2_Chloroflexi_49_20 species=Lachnospiraceae bacterium 7_1_58FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
13_1_20cm_3_scaffold_4237_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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10857..11828
DNA (972bp) protein (324aa)
Luciferase-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZI9_RUBXD
Luciferase-like protein {ECO:0000313|EMBL:ABG03189.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
luciferase-like protein
13_1_20cm_3_scaffold_4237_16
unknown

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comp(11834..12025)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_3_scaffold_4237_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(12040..12408)
DNA (369bp) protein (123aa)
putative F420-dependent protein Tax=CSP1_2_Dadabacteria
putative F420-dependent protein id=14426413 bin=bin1_lowGC species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
putative F420-dependent protein
13_1_20cm_3_scaffold_4237_18
unknown

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12448..12981
DNA (534bp) protein (178aa)

This feature has no annotations

Displaying 18 items

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