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13_1_20cm_3_scaffold_154

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_154_1
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3..1247)
DNA (1245bp) protein (415aa)
Protoporphyrinogen oxidase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9Z031_DACSA
Protoporphyrinogen oxidase {ECO:0000313|EMBL:AFZ51930.1}; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 83
protoporphyrinogen oxidase
13_1_20cm_3_scaffold_154_2
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(1274..2686)
DNA (1413bp) protein (471aa)
hemN; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RBG_16_Nitrospirae_43_11_curated
Coproporphyrinogen-III oxidase n=3 Tax=Leptospirillum RepID=J9ZAB2_LEPFM rbh
coproporphyrinogen III oxidase
13_1_20cm_3_scaffold_154_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(2699..3685)
DNA (987bp) protein (329aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGS0_CHLTF
13_1_20cm_3_scaffold_154_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3881..4711
DNA (831bp) protein (277aa)
cytochrome c assembly protein Tax=RBG_16_Deltaproteobacteria_54_11_curated
cytochrome c biogenesis protein id=14430642 bin=bin3_NC10 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
cytochrome C biogenesis protein CcsB
13_1_20cm_3_scaffold_154_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

4730..6007
DNA (1278bp) protein (426aa)
hemA; glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003641FCA
hemA: glutamyl-tRNA reductase
13_1_20cm_3_scaffold_154_6
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6004..6924
DNA (921bp) protein (307aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase (EC:2.5.1.61)
porphobilinogen deaminase n=1 Tax=Psychromonas ossibalaenae RepID=UPI00037FA43A
13_1_20cm_3_scaffold_154_7
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6989..7744
DNA (756bp) protein (252aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DSA8_DESRL
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67627.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
uroporphyrin-III C-methyltransferase
13_1_20cm_3_scaffold_154_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7741..8715
DNA (975bp) protein (325aa)
porphobilinogen synthase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJW7_THEYD rbh
13_1_20cm_3_scaffold_154_9
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

8735..10063
DNA (1329bp) protein (443aa)
glutamate-1-semialdehyde aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWC2_Nitrospirae_56_14_curated
Glutamate-1-semialdehyde 2,1-aminomutase id=4285684 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
glutamate-1-semialdehyde-2,1-aminomutase
13_1_20cm_3_scaffold_154_10
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10087..10626
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V7E5_TERSS
Uncharacterized protein {ECO:0000313|EMBL:ADV83919.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
hypothetical protein
13_1_20cm_3_scaffold_154_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10628..11215)
DNA (588bp) protein (196aa)
Membrane protein-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NM0_SOLUE
Predicted membrane protein {ECO:0000313|EMBL:CDM66770.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_154_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(11683..13092)
DNA (1410bp) protein (470aa)
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases (EC:6.3.5.6 6.3.5.7)
Amidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C792_SPHTD id=5225656 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
amidase Tax=RBG_16_RIF_WS3X_71_46_curated
13_1_20cm_3_scaffold_154_13
unknown

Not on your lists

comp(13105..13518)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_20cm_3_scaffold_154_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13935..16577
DNA (2643bp) protein (881aa)
Serine/threonine protein kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV32_KORVE rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:ABF39268.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
serine/threonine protein kinase
13_1_20cm_3_scaffold_154_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(16714..17409)
DNA (696bp) protein (232aa)
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen id=14631155 bin=bin9_gal15 species=Hirschia baltica genus=Hirschia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
13_1_20cm_3_scaffold_154_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17551..18030)
DNA (480bp) protein (160aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_3_scaffold_154_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18184..18981)
DNA (798bp) protein (266aa)
Putative Response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGH0_9BACT
putative response regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative response regulator
13_1_20cm_3_scaffold_154_18
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18978..19751)
DNA (774bp) protein (258aa)
Response regulator receiver protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT52_9BACT
response regulator Tax=CG_Delta_01
response regulator receiver modulated diguanylate cyclase
13_1_20cm_3_scaffold_154_19
unknown

Not on your lists

comp(19748..20227)
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_20cm_3_scaffold_154_20
unknown

Not on your lists

comp(20224..20757)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_3_scaffold_154_21
Glaciecola sp. 4H-3-7+YE-5, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20757..21251)
DNA (495bp) protein (165aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=983545 species="Bacteria; Proteobacteria; Gammap
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Glaciecola sp. (strain 4H-3-7+YE-5) RepID=F4AI72_GLAS4
Displaying 21 items

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