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13_1_20cm_3_scaffold_1748

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1748_1
unknown

Not on your lists

2..100
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_3_scaffold_1748_2
unknown

Not on your lists

451..804
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_3_scaffold_1748_3
unknown

Not on your lists

1386..1589
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_3_scaffold_1748_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1586..2635
DNA (1050bp) protein (350aa)
DNA binding domain protein, excisionase family n=1 Tax=Frankia sp. CN3 RepID=G6HIU5_9ACTO
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADP79711.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_20cm_3_scaffold_1748_5
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2996..3391)
DNA (396bp) protein (132aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PFS8_9CYAN
Transposase {ECO:0000313|EMBL:KEQ15876.1}; Flags: Fragment;; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomo
transposase IS116/IS110/IS902 family protein
13_1_20cm_3_scaffold_1748_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3680..4126
DNA (447bp) protein (149aa)
Putative transcriptional regulator n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8D3_ACIC5
Putative transcriptional regulator {ECO:0000313|EMBL:ACO32577.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatu
transcriptional regulator
13_1_20cm_3_scaffold_1748_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4351..5637)
DNA (1287bp) protein (429aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PG64_9DELT
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPX63370.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cys
ECF subfamily RNA polymerase sigma factor
13_1_20cm_3_scaffold_1748_8
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5727..6101)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KW45_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH15792.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_1_20cm_3_scaffold_1748_9
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(6319..6747)
DNA (429bp) protein (143aa)
Dgpf domain n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q093B4_STIAD
hypothetical protein Tax=RBG_16_Caldithrix_48_16_curated
Dgpf family protein
13_1_20cm_3_scaffold_1748_10
unknown

Not on your lists

comp(6929..7213)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_3_scaffold_1748_11
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

7485..8783
DNA (1299bp) protein (433aa)
sorA; Sulfite:cytochrome c oxidoreductase subunit A (EC:1.8.3.1) Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000379C9A0
oxidoreductase molybdopterin binding protein
13_1_20cm_3_scaffold_1748_12
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

8797..9207
DNA (411bp) protein (137aa)
sulfite dehydrogenase (cytochrome) subunit SorB (EC:1.8.2.1) Tax=RifOxyB12_full_Planctomycetes_42_10_curated
Sulfite dehydrogenase (Cytochrome) subunit SorB id=2177581 bin=GWA2_Planctomycete_KSU_39_15 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
sulfite dehydrogenase (cytochrome) subunit SorB
13_1_20cm_3_scaffold_1748_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9269..9676)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD1_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF40219.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_3_scaffold_1748_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9830..10132)
DNA (303bp) protein (101aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKZ0_KORVE
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF42460.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" s
efflux ABC transporter inner membrane protein
13_1_20cm_3_scaffold_1748_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10241..11065)
DNA (825bp) protein (275aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1III1_KORVE rbh
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABF43319.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
ABC transporter ATPase
13_1_20cm_3_scaffold_1748_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11094..11972)
DNA (879bp) protein (293aa)
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1III0_KORVE rbh
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit {ECO:0000313|EMBL:ABF43320.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Kori
nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein
13_1_20cm_3_scaffold_1748_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11982..13829)
DNA (1848bp) protein (616aa)
Outer membrane protein, OmpA/MotB family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIH9_KORVE rbh
Outer membrane protein, OmpA/MotB family {ECO:0000313|EMBL:ABF43321.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
OmpA/MotB family outer membrane protein
13_1_20cm_3_scaffold_1748_18
Serratia sp. DD3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13854..14885)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RA35_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KEY57255.1}; TaxID=1410619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. DD3
hypothetical protein
13_1_20cm_3_scaffold_1748_19
unknown

Not on your lists

comp(14895..15521)
DNA (627bp) protein (209aa)

This feature has no annotations

Displaying 19 items

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