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13_1_20cm_3_scaffold_212

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_212_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1..780)
DNA (780bp) protein (260aa)
Putative dihydroorotate dehydrogenase A (fumarate); Short=DHOD A;; Short=DHODase A;; Short=DHOdehase A;; EC=1.3.98.1;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Soli
Putative dihydroorotate dehydrogenase A (fumarate) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=PYRDA_SOLUE
dihydroorotate oxidase B, catalytic subunit
13_1_20cm_3_scaffold_212_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(874..1488)
DNA (615bp) protein (205aa)
hypothetical protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365D76D
hipA; protein HipA
13_1_20cm_3_scaffold_212_3
Fodinicurvata sediminis, Fodinicurvata, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1427..1600)
DNA (174bp) protein (58aa)
XRE family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B78DC3
13_1_20cm_3_scaffold_212_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1642..3405)
DNA (1764bp) protein (588aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=12557407 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
type I phosphodiesterase/nucleotide pyrophosphatase
13_1_20cm_3_scaffold_212_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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3521..4069
DNA (549bp) protein (183aa)
Uracil phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
uracil phosphoribosyltransferase (EC:2.4.2.9)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037CFDBF
13_1_20cm_3_scaffold_212_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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4109..5089
DNA (981bp) protein (327aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=PYRB_PELCD
13_1_20cm_3_scaffold_212_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

5076..6350
DNA (1275bp) protein (425aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
dihydroorotase (EC:3.5.2.3)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003772307 rbh
13_1_20cm_3_scaffold_212_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6406..7191)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ99_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF43051.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_3_scaffold_212_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(7206..8090)
DNA (885bp) protein (295aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Phosphomethylpyrimidine kinase n=1 Tax=Dialister sp. CAG:357 RepID=R7CS16_9FIRM
phosphomethylpyrimidine kinase
13_1_20cm_3_scaffold_212_10
unknown

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comp(8659..9249)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_20cm_3_scaffold_212_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(9285..10022)
DNA (738bp) protein (246aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZ00_ACISM
diguanylate cyclase (GGDEF) domain Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
diguanylate cyclase and metal dependent phosphohydrolase
13_1_20cm_3_scaffold_212_12
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(10056..11894)
DNA (1839bp) protein (613aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZ05_ACISM
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADW69920.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" s
peptidase S8 and S53 subtilisin kexin sedolisin
13_1_20cm_3_scaffold_212_13
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(12101..12901)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Actinomyces timonensis RepID=UPI00031AD884
Intracellular alkaline serine proteinase {ECO:0000313|EMBL:AIE87444.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fi
intracellular alkaline serine proteinase
13_1_20cm_3_scaffold_212_14
unknown

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13006..13191
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_3_scaffold_212_15

Not on your lists

comp(13461..14783)
DNA (1323bp) protein (441aa)
NAD-specific glutamate dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1BJB3_9ZZZZ
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:EQD53339.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_3_scaffold_212_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14873..15184)
DNA (312bp) protein (104aa)
TRASH domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SP1_SOLUE
TRASH domain protein {ECO:0000313|EMBL:ABJ87329.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (
Displaying 16 items

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