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13_1_20cm_3_scaffold_2863

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2863_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1..903
DNA (903bp) protein (301aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta-prime n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=UPI0000D76CD4
DNA-directed RNA polymerase subunit beta-prime
13_1_20cm_3_scaffold_2863_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1109..3754
DNA (2646bp) protein (882aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQS3_KORVE
signal transduction histidine kinase, nitrogen specific, NtrB
13_1_20cm_3_scaffold_2863_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(3819..4829)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QJT9_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_20cm_3_scaffold_2863_4
unknown

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comp(4998..5216)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_3_scaffold_2863_5
unknown

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5613..6104
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_20cm_3_scaffold_2863_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(5944..7383)
DNA (1440bp) protein (480aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curat
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GATA_KORVE
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
13_1_20cm_3_scaffold_2863_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(7568..7870)
DNA (303bp) protein (101aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobac
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUE6_KORVE
aspartyl/glutamyl-tRNA amidotransferase subunit C
13_1_20cm_3_scaffold_2863_8
unknown

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7989..8087
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_20cm_3_scaffold_2863_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(8395..9672)
DNA (1278bp) protein (426aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
gcpE; 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=12554811 bin=CNBR_ACIDO species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
13_1_20cm_3_scaffold_2863_10
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10105..12486
DNA (2382bp) protein (794aa)
Pyrrolo-quinoline quinone repeat-containing protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NTP9_GRAMM
Pyrrolo-quinoline quinone repeat-containing protein {ECO:0000313|EMBL:AEU36373.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulice
pyrrolo-quinoline quinone repeat-containing protein
13_1_20cm_3_scaffold_2863_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(12823..13353)
DNA (531bp) protein (177aa)
transcriptional regulator, MarR family Tax=CSP1_2_Dadabacteria
transcriptional regulator, MarR family id=14426137 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
transcriptional regulator, MarR family
13_1_20cm_3_scaffold_2863_12
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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13481..14038
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000375A90B
Transcriptional regulator, CadC {ECO:0000313|EMBL:ADV83529.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain
transcriptional regulator CadC
13_1_20cm_3_scaffold_2863_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(14064..14645)
DNA (582bp) protein (194aa)
Metal dependent phosphohydrolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTK7_KYRT2
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_2863_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15208..15918
DNA (711bp) protein (237aa)
Transcriptional regulator, XRE family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT4_KORVE
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABF40416.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
XRE family transcriptional regulator
13_1_20cm_3_scaffold_2863_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16015..16719)
DNA (705bp) protein (235aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_3_scaffold_2863_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(16751..17281)
DNA (531bp) protein (177aa)
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
shikimate kinase (EC:2.7.1.71)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375E787
13_1_20cm_3_scaffold_2863_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17367..18155)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI0003497C1B
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
Displaying 17 items

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