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13_1_20cm_3_scaffold_5242

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5242_1
unknown

Not on your lists

3..173
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(300..917)
DNA (618bp) protein (206aa)
putative threonine efflux protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
putative threonine efflux protein id=14631569 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin9_gal15 organism_group=GAL15
Lysine exporter protein (LYSE/YGGA)
13_1_20cm_3_scaffold_5242_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(984..1631)
DNA (648bp) protein (216aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX56_9GAMM
Dihydrofolate reductase {ECO:0000313|EMBL:AGG87422.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
dihydrofolate reductase
13_1_20cm_3_scaffold_5242_4
unknown

Not on your lists

comp(1664..2071)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_5
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2474..3559)
DNA (1086bp) protein (362aa)
Acyltransferase n=1 Tax=Salmonella enterica subsp. houtenae serovar 50:g,z51:- str. 01-0133 RepID=V1H7J2_SALHO rbh
Acyltransferase {ECO:0000313|EMBL:ESE88593.1}; TaxID=1173948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica su
acyltransferase
13_1_20cm_3_scaffold_5242_6
unknown

Not on your lists

comp(3794..4042)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_7
unknown

Not on your lists

4388..4567
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_8
unknown

Not on your lists

comp(4685..4861)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_9
unknown

Not on your lists

comp(4827..5084)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_10
unknown

Not on your lists

5717..5956
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_11
unknown

Not on your lists

5959..6252
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_12
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6416..6745)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDK8_METPP
Uncharacterized protein {ECO:0000313|EMBL:ABM93647.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
hypothetical protein
13_1_20cm_3_scaffold_5242_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6783..7067)
DNA (285bp) protein (95aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Plasmid maintenance system antidote protein, XRE family id=4527441 bin=GWC2_Methylomirabilis_70_16 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator, XRE family
13_1_20cm_3_scaffold_5242_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7076..7354)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036E88CB
plasmid maintenance system killer; K07334 proteic killer suppression protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Plasmid maintenance system killer
13_1_20cm_3_scaffold_5242_15
unknown

Not on your lists

comp(7386..7622)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_16
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7579..7977)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00035CC05D
Cold-shock protein {ECO:0000313|EMBL:AJC46335.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
excalibur domain-containing protein
13_1_20cm_3_scaffold_5242_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7999..8238)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B6FCB4
Uncharacterized protein {ECO:0000313|EMBL:ABD08458.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
hypothetical protein
13_1_20cm_3_scaffold_5242_18
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8210..8497)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNK3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EAT03287.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
hypothetical protein
13_1_20cm_3_scaffold_5242_19
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8646..9218)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Shewanella baltica (strain OS223) RepID=B8E7J7_SHEB2
Uncharacterized protein {ECO:0000313|EMBL:ACK46956.1}; TaxID=407976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (s
hypothetical protein
13_1_20cm_3_scaffold_5242_20
unknown

Not on your lists

comp(9319..9762)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_21
Synechococcus sp. PCC 7502, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9895..10620)
DNA (726bp) protein (242aa)
HEAT repeat protein n=1 Tax=Synechococcus sp. PCC 7502 RepID=K9SZL4_9SYNE
HEAT repeat protein {ECO:0000313|EMBL:AFY75341.1}; Flags: Precursor;; TaxID=1173263 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. P
HEAT repeat containing protein
13_1_20cm_3_scaffold_5242_22
unknown

Not on your lists

comp(10737..11144)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_23
unknown

Not on your lists

comp(11148..11522)
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_24
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11656..11964)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YLU4_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX31077.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmen
hypothetical protein
13_1_20cm_3_scaffold_5242_25
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11961..12302)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSD3_9CHLB
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
addiction module protein
13_1_20cm_3_scaffold_5242_26
unknown

Not on your lists

comp(12348..12767)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_27
unknown

Not on your lists

comp(12837..13415)
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_20cm_3_scaffold_5242_28
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13546..13743)
DNA (198bp) protein (66aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Putative uncharacterized protein id=3984532 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying 28 items

View Taxonomy