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13_1_20cm_3_scaffold_10606

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_10606_1
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131..325
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036142A5
Uncharacterized protein {ECO:0000313|EMBL:CBS89957.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
hypothetical protein
13_1_20cm_3_scaffold_10606_2
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322..771
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036A025A
Putative transcriptional regulator {ECO:0000313|EMBL:EIG55567.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source=
hypothetical protein
13_1_20cm_3_scaffold_10606_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(699..1769)
DNA (1071bp) protein (357aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=862719 species="Bacteria; Pr
DNA gyrase subunit B n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7E2_AZOL4
gyrB; DNA gyrase subunit B
13_1_20cm_3_scaffold_10606_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1811..3160)
DNA (1350bp) protein (450aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1398085 species="Bacteria; P
gyrB; DNA gyrase, subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=alpha proteobacterium BAL199 RepID=A8U128_9PROT
13_1_20cm_3_scaffold_10606_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3184..4449)
DNA (1266bp) protein (422aa)
DNA replication and repair protein RecF n=1 Tax=Oceanibaculum indicum P24 RepID=K2IMW9_9PROT rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
recF; DNA replication and repair protein
13_1_20cm_3_scaffold_10606_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4518..5651)
DNA (1134bp) protein (378aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1385368 species="Bacte
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZK35_9PROT
13_1_20cm_3_scaffold_10606_7
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6139..6759
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QXS0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EPX84448.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicro
13_1_20cm_3_scaffold_10606_8
unknown

Not on your lists

6793..7314
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_20cm_3_scaffold_10606_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7618..7878)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NY29_AZOS1
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus
rpsT; 30S ribosomal protein S20
13_1_20cm_3_scaffold_10606_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8003..8788)
DNA (786bp) protein (262aa)
paaF; enoyl-CoA hydratase-isomerase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K202_9PROT rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EKE71525.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanib
13_1_20cm_3_scaffold_10606_11
unknown

Not on your lists

9196..9408
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_3_scaffold_10606_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9438..10265)
DNA (828bp) protein (276aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
Formamidopyrimidine-DNA glycosylase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NY32_AZOS1 rbh
fpg; formamidopyrimidine-DNA glycosylase
13_1_20cm_3_scaffold_10606_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10602..11060
DNA (459bp) protein (153aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-meth
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B49ABA
2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone methyltransferase
13_1_20cm_3_scaffold_10606_14
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11085..12641
DNA (1557bp) protein (519aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodo
Ubiquinone biosynthesis protein ubiB n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXA5_PHAMO
ubiB; 2-polyprenylphenol 6-hydroxylase
13_1_20cm_3_scaffold_10606_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12608..13615)
DNA (1008bp) protein (336aa)
Putative dioxygenase, 2OG-Fe(II) oxygenase superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMT8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETX02243.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
2OG-Fe(II) oxygenase superfamily protein
13_1_20cm_3_scaffold_10606_16
unknown

Not on your lists

comp(13667..13852)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_3_scaffold_10606_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14179..15084)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1B7_9PROT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 17 items

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