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13_1_20cm_3_scaffold_11130

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_11130_1
unknown

Not on your lists

2..124
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_20cm_3_scaffold_11130_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121..831
DNA (711bp) protein (237aa)
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:KJB97267.1}; EC=2.1.1.130 {ECO:0000313|EMBL:KJB97267.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rh
cobI; Precorrin-2 C(20)-methyltransferase (EC:2.1.1.130)
precorrin-2 C20-methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B629F1
13_1_20cm_3_scaffold_11130_3
unknown

Not on your lists

comp(706..1332)
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_20cm_3_scaffold_11130_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1634..2431
DNA (798bp) protein (266aa)
Precorrin-3B methylase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U384_9PROT
Precorrin-3B methylase {ECO:0000313|EMBL:KJB97266.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aero
cobJ; precorrin-3B C(17)-methyltransferase
13_1_20cm_3_scaffold_11130_5
unknown

Not on your lists

comp(2407..2667)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_3_scaffold_11130_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3262..3468
DNA (207bp) protein (69aa)
General substrate transporter:Major facilitator superfamily MFS_1 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46NG6_CUPPJ
MFS transporter {ECO:0000313|EMBL:ETR77955.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
major facilitator transporter
13_1_20cm_3_scaffold_11130_7
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3483..4559
DNA (1077bp) protein (359aa)
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia graminis C4D1M RepID=B1FUB4_9BURK
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EDT12168.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
major facilitator transporter
13_1_20cm_3_scaffold_11130_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4567..5832)
DNA (1266bp) protein (422aa)
Major facilitator transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JK32_9PROT rbh
Major facilitator transporter {ECO:0000313|EMBL:EKE74802.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanib
major facilitator superfamily protein
13_1_20cm_3_scaffold_11130_9

Not on your lists

5947..7107
DNA (1161bp) protein (387aa)
pyridoxal 4-dehydrogenase (EC:1.1.1.107)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000372AC6F rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN96356.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_11130_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7243..8010)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CW57_9BRAD
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KJB90583.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_11130_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8150..8788
DNA (639bp) protein (213aa)
Permease n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJZ1_9PROT
Permease {ECO:0000313|EMBL:EDP66928.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
integral membrane efflux protein
13_1_20cm_3_scaffold_11130_12
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8799..9362
DNA (564bp) protein (188aa)
Permease n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJZ1_9PROT
Permease {ECO:0000313|EMBL:EDP66928.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
major facilitator superfamily protein
13_1_20cm_3_scaffold_11130_13
unknown

Not on your lists

9446..9610
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_3_scaffold_11130_14
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9945..10235
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B70037
Uncharacterized protein {ECO:0000313|EMBL:ACL58538.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
hypothetical protein
13_1_20cm_3_scaffold_11130_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10267..10560
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEI9_AZOBR
UPF0235 protein AZOBR_10135 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospi
hypothetical protein
13_1_20cm_3_scaffold_11130_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10616..11425
DNA (810bp) protein (270aa)
pcaD; 3-oxoadipate enol-lactonase (EC:3.1.1.24); K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
3-oxoadipate enol-lactonase n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U4Z6_RHOSH
alpha/beta hydrolase family protein
13_1_20cm_3_scaffold_11130_17
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11578..12057)
DNA (480bp) protein (160aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5AB66
argininosuccinate synthase
13_1_20cm_3_scaffold_11130_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12051..12716)
DNA (666bp) protein (222aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JFU9_9PROT
13_1_20cm_3_scaffold_11130_19
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12759..13865)
DNA (1107bp) protein (369aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AF30_AZOBR
50S rRNA methyltransferase
13_1_20cm_3_scaffold_11130_20
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14006..14590)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6C3_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:CBS88003.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
hypothetical protein
13_1_20cm_3_scaffold_11130_21
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14714..15268
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Caldibacillus debilis RepID=UPI0003631124
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ACJ01310.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodos
acetyltransferase, GNAT family
13_1_20cm_3_scaffold_11130_22
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15276..15677)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035C8166
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
cytochrome c-type biogenesis protein CcmE
13_1_20cm_3_scaffold_11130_23
unknown

Not on your lists

comp(15674..15847)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_20cm_3_scaffold_11130_24
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15853..16626)
DNA (774bp) protein (258aa)
Cytochrome c-type biogenesis protein CycZ n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z756_AZOL4 rbh
Heme transporter HemC {ECO:0000313|EMBL:KJR65999.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thio
cycZ; Cytochrome c-type biogenesis protein CycZ
13_1_20cm_3_scaffold_11130_25
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16708..17373)
DNA (666bp) protein (222aa)
Heme exporter protein B n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYF7_AZOS1
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella s
ccmB; heme exporter membrane protein
13_1_20cm_3_scaffold_11130_26
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17373..17918)
DNA (546bp) protein (182aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000255|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000255|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000255|HAMAP-Rule:MF_01707}; Ta
cytochrome c biogenesis protein CcmA (EC:3.6.3.41)
Cytochrome c biogenesis ATP-binding export protein CcmA n=2 Tax=Rhodospirillum rubrum RepID=CCMA_RHORT
13_1_20cm_3_scaffold_11130_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18230..18904)
DNA (675bp) protein (225aa)
AMP-dependent synthetase n=1 Tax=Caldimonas manganoxidans RepID=UPI00035C1A2A
Putative phenylacetate-CoA ligase {ECO:0000313|EMBL:ACB35699.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain
putative phenylacetate-CoA ligase
Displaying 27 items

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