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13_1_20cm_3_scaffold_1171

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1171_1
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..186
DNA (186bp) protein (62aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SM20_RHOPH
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:KIL99428.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
13_1_20cm_3_scaffold_1171_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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274..597
DNA (324bp) protein (108aa)
carboxymuconolactone decarboxylase (EC:1.11.1.15) Tax=GWA2_Rokubacteria_73_35_curated
Carboxymuconolactone decarboxylase id=4243558 bin=GWC2_Methylomirabilis_70_24 species=Yersinia bercovieri genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Carboxymuconolactone decarboxylase
13_1_20cm_3_scaffold_1171_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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915..1640
DNA (726bp) protein (242aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=GWA2_Rokubacteria_73_35_curated
3-hydroxyisobutyrate dehydrogenase id=3352297 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxy-3-oxopropionate reductase
13_1_20cm_3_scaffold_1171_4
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1662..3725
DNA (2064bp) protein (688aa)
Hydantoin utilization protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K477_AGRVS rbh
Hydantoin utilization protein {ECO:0000313|EMBL:ACM39731.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteriu
hyuA; hydantoin utilization protein
13_1_20cm_3_scaffold_1171_5
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3756..4319
DNA (564bp) protein (188aa)
membrane protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002D88BE4
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CAL92987.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp
hypothetical protein
13_1_20cm_3_scaffold_1171_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4339..5205)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000370D88D
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ACP26104.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorh
transmembrane anti-sigma factor
13_1_20cm_3_scaffold_1171_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5189..5776)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI0003746F26
RNA polymerase sigma70 factor {ECO:0000313|EMBL:ESZ15024.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_3_scaffold_1171_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6080..7258
DNA (1179bp) protein (393aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZA93_AZOL4
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:KJB96295.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="S
pntAA1; NAD(P) transhydrogenase subunit alpha part 1
13_1_20cm_3_scaffold_1171_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7269..7676
DNA (408bp) protein (136aa)
NAD(P) transhydrogenase, subunit alpha part 2 {ECO:0000313|EMBL:CCC97695.1}; EC=1.6.1.2 {ECO:0000313|EMBL:CCC97695.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiri
NAD(P) transhydrogenase, subunit alpha part 2 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKD3_AZOBR
NAD(P) transhydrogenase subunit alpha part 2
13_1_20cm_3_scaffold_1171_10
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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7694..9088
DNA (1395bp) protein (465aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJB5_9PROT rbh
pntB2; NAD(P) transhydrogenase subunit beta rbh
13_1_20cm_3_scaffold_1171_11
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9101..9310)
DNA (210bp) protein (70aa)
30S ribosomal protein S21 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RS21_RHOCS
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodosp
rpsU; 30S ribosomal protein S21
13_1_20cm_3_scaffold_1171_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9652..9933
DNA (282bp) protein (94aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5Z2_9PROT
def2; Formylmethionine deformylase
13_1_20cm_3_scaffold_1171_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9930..10568
DNA (639bp) protein (213aa)
Ubiquinone biosynthesis protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVZ3_AZOS1
Ubiquinone biosynthesis protein {ECO:0000313|EMBL:BAI72572.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospir
ubiquinone biosynthesis protein
13_1_20cm_3_scaffold_1171_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10597..11247)
DNA (651bp) protein (217aa)
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AK66_AZOBR
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
Displaying 14 items

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