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13_1_20cm_3_scaffold_2473

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2473_1
unknown

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2..112
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_20cm_3_scaffold_2473_2
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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147..803
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5R7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN86407.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
hypothetical protein
13_1_20cm_3_scaffold_2473_3
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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836..1606
DNA (771bp) protein (257aa)
Trans-aconitate 2-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00560}; EC=2.1.1.144 {ECO:0000255|HAMAP-Rule:MF_00560};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales
tam; trans-aconitate 2-methyltransferase (EC:2.1.1.144)
Trans-aconitate 2-methyltransferase n=1 Tax=Azoarcus sp. (strain BH72) RepID=TAM_AZOSB
13_1_20cm_3_scaffold_2473_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1755..2939
DNA (1185bp) protein (395aa)
Class I and II aminotransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KK67_9PROT rbh
Class I and II aminotransferase {ECO:0000313|EMBL:EKE77740.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Ocean
class I and II aminotransferase
13_1_20cm_3_scaffold_2473_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3075..3413
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Oceanibaculum indicum P24 RepID=K2J421_9PROT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EKE77741.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Ocea
glnB; Nitrogen regulatory protein P-II
13_1_20cm_3_scaffold_2473_6
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3624..3989
DNA (366bp) protein (122aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirilla
glnA; Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI) (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3H2_9PROT
13_1_20cm_3_scaffold_2473_7
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3986..4960
DNA (975bp) protein (325aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356, ECO:0000313|EMBL:CCQ73726.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
glnA; Glutamine synthetase I (Glutamate--ammonia ligase I) (GSI) (EC:6.3.1.2)
glutamine synthetase n=1 Tax=Elioraea tepidiphila RepID=UPI00037F020D
13_1_20cm_3_scaffold_2473_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5371..6741
DNA (1371bp) protein (457aa)
Ammonium transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS12_NITHX rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nit
ammonium transporter
13_1_20cm_3_scaffold_2473_9
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6975..8222
DNA (1248bp) protein (416aa)
Putative uncharacterized protein n=3 Tax=Acidithiobacillus RepID=B5EM62_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:CDQ11455.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acid
hypothetical protein
13_1_20cm_3_scaffold_2473_10
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8303..8641
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=2 Tax=Rhodospirillum rubrum RepID=GLNB_RHORT
Nitrogen regulatory protein P-II; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC
nitrogen regulatory protein P-II
13_1_20cm_3_scaffold_2473_11
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(8680..9165)
DNA (486bp) protein (162aa)
Methionine-R-sulfoxide reductase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GHN3_9CYAN
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EKQ66991.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;
putative methionine sulfoxide reductase B
13_1_20cm_3_scaffold_2473_12
unknown

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comp(9284..9493)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_3_scaffold_2473_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9646..11682
DNA (2037bp) protein (679aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1430440 species="Ba
parE; DNA topoisomerase IV, subunit B (EC:5.99.1.-)
DNA topoisomerase IV, subunit B n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXY7_9PROT rbh
13_1_20cm_3_scaffold_2473_14
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11956..12162
DNA (207bp) protein (69aa)
Cold-shock DNA-binding domain protein n=3 Tax=Hyphomicrobium RepID=D8JRF7_HYPDA
DNA-binding transcriptional repressor {ECO:0000313|EMBL:AGK56559.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyph
cold-shock DNA-binding domain-containing protein
13_1_20cm_3_scaffold_2473_15
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12245..12511
DNA (267bp) protein (89aa)
Translation initiation factor IF-1 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J5J6_HYPSM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyp
infA; translation initiation factor if-1 (infA)
Displaying 15 items

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