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13_1_20cm_3_scaffold_592

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_592_1
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..404)
DNA (402bp) protein (134aa)
Glyoxalase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJ43_9PROT
Glyoxalase {ECO:0000313|EMBL:EKE75278.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.
gloA1; glyoxalase
13_1_20cm_3_scaffold_592_2
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411..1628)
DNA (1218bp) protein (406aa)
Lipid-A-disaccharide synthase {ECO:0000255|HAMAP-Rule:MF_00392}; EC=2.4.1.182 {ECO:0000255|HAMAP-Rule:MF_00392};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=LPXB_RHOCS
13_1_20cm_3_scaffold_592_3
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1653..2483)
DNA (831bp) protein (277aa)
UDP-2,3-diacylglucosamine pyrophosphatase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HKC4_9PROT rbh
UDP-2,3-diacylglucosamine pyrophosphatase {ECO:0000313|EMBL:KJS39565.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospiri
Conserved protein of unknown function
13_1_20cm_3_scaffold_592_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2473..3273)
DNA (801bp) protein (267aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4M3_AZOL4 rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
lpxA; UDP-N-acetylglucosamine acyltransferase
13_1_20cm_3_scaffold_592_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3281..3754)
DNA (474bp) protein (158aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4M2_AZOL4
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
13_1_20cm_3_scaffold_592_6
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3751..4773)
DNA (1023bp) protein (341aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodos
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z8Y9_9PROT rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_20cm_3_scaffold_592_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4796..5473)
DNA (678bp) protein (226aa)
Outer membrane protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NV26_AZOS1
Outer membrane protein {ECO:0000313|EMBL:BAI72255.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp.
outer membrane protein
13_1_20cm_3_scaffold_592_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5473..7836)
DNA (2364bp) protein (788aa)
Outer membrane protein assembly factor BamA n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY5_AZOBR rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
membrane protein
13_1_20cm_3_scaffold_592_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7918..9063)
DNA (1146bp) protein (382aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031, ECO:0000313|EMBL:KJB97024.1}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
Zinc metalloprotease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKY4_AZOBR rbh
zinc metalloprotease
13_1_20cm_3_scaffold_592_10
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9079..10326)
DNA (1248bp) protein (416aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4L9_AZOL4 rbh
13_1_20cm_3_scaffold_592_11
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10317..11075)
DNA (759bp) protein (253aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
Phosphatidate cytidylyltransferase n=2 Tax=Rhodospirillum rubrum RepID=G2T8B8_RHORU
phosphatidate cytidylyltransferase
13_1_20cm_3_scaffold_592_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11116..11847)
DNA (732bp) protein (244aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospi
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9Y1_PHAFV rbh
13_1_20cm_3_scaffold_592_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11847..12407)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Oceanibaculum indicum P24 RepID=K2KDB1_9PROT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1207063 species="Bacteria;
Ribosome recycling factor
13_1_20cm_3_scaffold_592_14
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12462..13202)
DNA (741bp) protein (247aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISU9_RHOCS rbh
13_1_20cm_3_scaffold_592_15
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13303..14229)
DNA (927bp) protein (309aa)
Elongation factor Ts n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=EFTS_RHOCS rbh
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospir
tsf; elongation factor Ts
13_1_20cm_3_scaffold_592_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14281..15126)
DNA (846bp) protein (282aa)
30S ribosomal protein S2 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z647_AZOL4 rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum
30S ribosomal protein S2
13_1_20cm_3_scaffold_592_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15370..15693
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAF9_9GAMM
NIPSNAP family containing protein {ECO:0000313|EMBL:ETW97806.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp.
NIPSNAP family containing protein
13_1_20cm_3_scaffold_592_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15751..17961)
DNA (2211bp) protein (737aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2JY99_9PROT rbh
Displaying 18 items

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