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13_1_20cm_3_scaffold_74

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_74_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..356)
DNA (354bp) protein (118aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_16_Acidobacteria_68_9_curated
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CZ3_SOLUE
13_1_20cm_3_scaffold_74_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(393..1511)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000370AE84
oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_3_scaffold_74_3
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1862..3214
DNA (1353bp) protein (451aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS61494.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
13_1_20cm_3_scaffold_74_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3328..4380)
DNA (1053bp) protein (351aa)
aminoglycoside phosphotransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630AC4 rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AJP71900.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphi
aminoglycoside phosphotransferase
13_1_20cm_3_scaffold_74_5
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4538..5308
DNA (771bp) protein (257aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
gluconate 2-dehydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D6DB34 rbh
3-oxoacyl-ACP reductase
13_1_20cm_3_scaffold_74_6
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5322..5789)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E76166
Aromatic compound catabolic protein {ECO:0000313|EMBL:KIF82546.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herb
hypothetical protein
13_1_20cm_3_scaffold_74_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6081..7169
DNA (1089bp) protein (363aa)
alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000374BE4D rbh
alcohol dehydrogenase zinc-binding domain-containing protein
13_1_20cm_3_scaffold_74_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7173..8288)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I3E4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT70526.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
AraC family transcriptional regulator
13_1_20cm_3_scaffold_74_9
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8646..11168
DNA (2523bp) protein (841aa)
TonB-dependent receptor n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8H4T5_CAUCN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ83215.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
TonB-dependent receptor
13_1_20cm_3_scaffold_74_10
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11240..13351
DNA (2112bp) protein (704aa)
putative fatty acid degradation protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
fadB; multifunctional: 3-hydroxybutyryl-CoA epimerase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) (EC:1.1.1.35 4.2.1.17); K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] id=12552165 bin=BDI species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_3_scaffold_74_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13348..14526
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase (EC:2.3.1.16 2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QM37_9BURK rbh
13_1_20cm_3_scaffold_74_12
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14540..15760
DNA (1221bp) protein (407aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Isovaleryl-CoA dehydrogenase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T9Q5_9GAMM rbh
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EIT70548.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydroca
13_1_20cm_3_scaffold_74_13
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15770..17470
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003073A33
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:BAO28926.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritale
long-chain-fatty-acid--CoA ligase
13_1_20cm_3_scaffold_74_14
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17467..18465
DNA (999bp) protein (333aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VDR8_CAUST rbh
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:KFG70100.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aeri
alcohol dehydrogenase zinc-binding domain-containing protein
13_1_20cm_3_scaffold_74_15
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18475..19686
DNA (1212bp) protein (404aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Putative acyl-CoA dehydrogenase oxidoreductase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZF89_9GAMM rbh
putative acyl-CoA dehydrogenase oxidoreductase
13_1_20cm_3_scaffold_74_16
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19698..20858
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TA66_9GAMM rbh
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
hypothetical protein
13_1_20cm_3_scaffold_74_17
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20855..21352
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WGL5_DESOD
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
13_1_20cm_3_scaffold_74_18
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21353..22120
DNA (768bp) protein (256aa)
membrane protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035FE6B4 rbh
Aldolase {ECO:0000313|EMBL:KIF79886.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
aldolase II superfamily protein
13_1_20cm_3_scaffold_74_19
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(22688..22966)
DNA (279bp) protein (93aa)
S9C family peptidase (EC:3.4.-.-); K01423 [EC:3.4.-.-] id=24390812 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Peptidase S9 {ECO:0000313|EMBL:KDA53033.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
S9C family peptidase
13_1_20cm_3_scaffold_74_20
unknown

Not on your lists

23579..23737
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 20 items

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