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13_1_20cm_3_scaffold_845

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_845_1
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..458)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035CCEF8
ubiquinol-cytochrome C chaperone Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
uqcc; ubiquinol-cytochrome C chaperone
13_1_20cm_3_scaffold_845_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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579..1112
DNA (534bp) protein (178aa)
SmpA/OmlA domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K452_9PROT
Membrane protein SmpA {ECO:0000313|EMBL:KJB93826.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerol
conserved protein of unknown function (containing Small protein A domain, TmRNA-binding)
13_1_20cm_3_scaffold_845_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1143..1580)
DNA (438bp) protein (146aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NTC0_AZOS1
13_1_20cm_3_scaffold_845_4
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

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1881..2093
DNA (213bp) protein (71aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
13_1_20cm_3_scaffold_845_5
unknown

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2289..2453
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_3_scaffold_845_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3337..4317)
DNA (981bp) protein (327aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX89_PARL1 rbh
thiamine-monophosphate kinase
13_1_20cm_3_scaffold_845_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4324..4821)
DNA (498bp) protein (166aa)
N utilization substance protein B homolog n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMQ3_AZOBR
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1064539 species="Bacteria; Prot
nusB; transcription antitermination factor
13_1_20cm_3_scaffold_845_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4818..5279)
DNA (462bp) protein (154aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMS5_RHOCS
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
13_1_20cm_3_scaffold_845_9
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5276..5896)
DNA (621bp) protein (207aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase subunit alpha n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y9S9_9PROT
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:EME69781.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="
13_1_20cm_3_scaffold_845_10
unknown

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6101..6385
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_3_scaffold_845_11
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6396..7574)
DNA (1179bp) protein (393aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4T0_MAGSA rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" sour
riboflavin biosynthesis protein ribD
13_1_20cm_3_scaffold_845_12
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7564..8022)
DNA (459bp) protein (153aa)
NrdR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B2F6F7
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
nrdR; transcriptional repressor of nrd genes
13_1_20cm_3_scaffold_845_13
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8067..9446)
DNA (1380bp) protein (460aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TL26_9PROT rbh
13_1_20cm_3_scaffold_845_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9764..10213
DNA (450bp) protein (150aa)
Putative transcriptional regulator, Ros/MucR family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5I7_AZOL4
Putative transcriptional regulator, Ros/MucR family {ECO:0000313|EMBL:CBS86203.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillu
putative transcriptional regulator, Ros/MucR family
13_1_20cm_3_scaffold_845_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10359..11507
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K462_9PROT rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EKE77709.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum
glutaryl-CoA dehydrogenase
Displaying 15 items

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