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13_1_20cm_3_scaffold_1688

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1688_1
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..418
DNA (417bp) protein (139aa)
PE-PGRS family protein n=1 Tax=Mycobacterium canettii (strain CIPT 140010059) RepID=G0TJ09_MYCCP
Transmembrane protein {ECO:0000313|EMBL:KFC73557.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
PE_PGRS54-2; PE-PGRS family protein
13_1_20cm_3_scaffold_1688_2

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comp(415..1131)
DNA (717bp) protein (239aa)
Hydrolase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LDS8_THEPS
Uncharacterized protein {ECO:0000313|EMBL:KKK47222.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hydrolase
13_1_20cm_3_scaffold_1688_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1184..2497
DNA (1314bp) protein (438aa)
Diaminopimelate decarboxylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F242_CONWI
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
diaminopimelate decarboxylase
13_1_20cm_3_scaffold_1688_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2494..3627
DNA (1134bp) protein (378aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacte
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F243_CONWI
13_1_20cm_3_scaffold_1688_5
unknown

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3624..3812
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_3_scaffold_1688_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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3797..4831
DNA (1035bp) protein (345aa)
Threonine synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F244_CONWI
Threonine synthase {ECO:0000313|EMBL:ADB50219.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (
threonine synthase
13_1_20cm_3_scaffold_1688_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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4934..5548
DNA (615bp) protein (205aa)
competence protein ComF n=1 Tax=Patulibacter americanus RepID=UPI0003B5BA79
phosphoribosyltransferase Tax=GWC2_RIF_CHLX_73_18_curated
phosphoribosyltransferase
13_1_20cm_3_scaffold_1688_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5645..5992
DNA (348bp) protein (116aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F918_CONWI
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ADB53013.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
sigma 54 modulation protein/ribosomal protein S30EA
13_1_20cm_3_scaffold_1688_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6163..8994
DNA (2832bp) protein (944aa)
Protein translocase subunit SecA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F917_CONWI rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacterace
preprotein translocase subunit SecA
13_1_20cm_3_scaffold_1688_10
unknown

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8984..9382
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_3_scaffold_1688_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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9379..9999
DNA (621bp) protein (207aa)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:ACY96761.1}; EC=3.2.2.20 {ECO:0000313|EMBL:ACY96761.1};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; T
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000376358E
13_1_20cm_3_scaffold_1688_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10140..11123
DNA (984bp) protein (328aa)
Peptide chain release factor 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F914_CONWI
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=469383 species="Bacteria; Actinobacteria; Thermole
peptide chain release factor 2
13_1_20cm_3_scaffold_1688_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11187..11456
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE56_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51672.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
Displaying 13 items

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