ggKbase home page

13_1_20cm_3_scaffold_104

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_104_1
unknown

Not on your lists

comp(1..276)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_3_scaffold_104_2
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

558..2015
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MUA2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ40256.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
13_1_20cm_3_scaffold_104_3
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1993..3486)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6K6K0_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST27046.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
hypothetical protein
13_1_20cm_3_scaffold_104_4
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3744..4445
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82HB5_STRAW
Uncharacterized protein {ECO:0000313|EMBL:BAC71307.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATC
hypothetical protein
13_1_20cm_3_scaffold_104_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4499..4996
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QEK9_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU72779.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein
13_1_20cm_3_scaffold_104_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5397..6101
DNA (705bp) protein (235aa)
Isochorismatase hydrolase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWL8_CATAD rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:ACU75298.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain
isochorismatase hydrolase rbh
13_1_20cm_3_scaffold_104_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6251..7897
DNA (1647bp) protein (549aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWL9_CATAD rbh
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:ACU75299.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila
xanthine/uracil/vitamin C permease rbh
13_1_20cm_3_scaffold_104_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7971..8633)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWM0_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU75300.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_104_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8737..9447
DNA (711bp) protein (237aa)
Transcriptional regulator, GntR family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWM1_CATAD rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACU75301.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidip
GntR family transcriptional regulator rbh
13_1_20cm_3_scaffold_104_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9544..10263
DNA (720bp) protein (240aa)
Isochorismatase hydrolase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PWM2_CATAD rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:ACU75302.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain
isochorismatase hydrolase rbh
13_1_20cm_3_scaffold_104_11
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10357..10806
DNA (450bp) protein (150aa)
hypothetical protein n=2 Tax=Salinispora arenicola RepID=UPI00037F6714
Uncharacterized protein {ECO:0000313|EMBL:GAJ79475.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein
13_1_20cm_3_scaffold_104_12
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10997..13807)
DNA (2811bp) protein (937aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003794468 rbh
Putative secreted protein {ECO:0000313|EMBL:CCK25993.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.
putative secreted protein rbh
13_1_20cm_3_scaffold_104_13
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14057..15070
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4R033_9ACTO rbh
Transcriptional regulator, LacI family protein {ECO:0000313|EMBL:CCK25994.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
transcriptional regulator, LacI family protein rbh
13_1_20cm_3_scaffold_104_14
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15197..18148
DNA (2952bp) protein (984aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613, ECO:0000313|EMBL:CCK25995.1}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613, ECO:0000313|EMBL:CCK25995.1};; TaxID=1214101 species="Bacteria; Actinobacte
lacZ1; Beta-galactosidase (EC:3.2.1.23) rbh
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00035EC4A0 rbh
13_1_20cm_3_scaffold_104_15
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18222..19547
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00037620DE rbh
Putative secreted protein {ECO:0000313|EMBL:CCK25996.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.
putative secreted protein rbh
13_1_20cm_3_scaffold_104_16
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19652..20632
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00035E01C3 rbh
ABC transporter, permease protein {ECO:0000313|EMBL:CCK25997.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis J
ABC transporter, permease protein rbh
13_1_20cm_3_scaffold_104_17
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20629..21525
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00036B6DF2 rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:CCK25998.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM
sugar ABC transporter permease rbh
13_1_20cm_3_scaffold_104_18
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21575..23074
DNA (1500bp) protein (500aa)
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:ACU72495.1}; EC=3.2.1.55 {ECO:0000313|EMBL:ACU72495.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispor
alpha-N-arabinofuranosidase (EC:3.2.1.55) rbh
Alpha-N-arabinofuranosidase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QAJ6_CATAD rbh
13_1_20cm_3_scaffold_104_19
unknown

Not on your lists

comp(23122..23574)
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_20cm_3_scaffold_104_20
unknown

Not on your lists

comp(24371..24793)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_3_scaffold_104_21
unknown

Not on your lists

comp(24797..25117)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_20cm_3_scaffold_104_22
unknown

Not on your lists

comp(25229..25534)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_3_scaffold_104_23
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26120..28939
DNA (2820bp) protein (940aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NJV6_KITSK rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ33254.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33
hypothetical protein rbh
13_1_20cm_3_scaffold_104_24
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29135..29755)
DNA (621bp) protein (207aa)
endonuclease n=1 Tax=Salinispora arenicola RepID=UPI00037E1271
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ABV97042.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola
endonuclease/exonuclease/phosphatase
13_1_20cm_3_scaffold_104_25
unknown

Not on your lists

comp(29784..30077)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_3_scaffold_104_26
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30399..31187
DNA (789bp) protein (263aa)
DNA glycosylase/AP lyase, H2TH DNA-binding n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q901_CATAD rbh
DNA glycosylase/AP lyase, H2TH DNA-binding {ECO:0000313|EMBL:ACU72321.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
DNA glycosylase/AP lyase rbh
13_1_20cm_3_scaffold_104_27
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31264..31914)
DNA (651bp) protein (217aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q1I2_CATAD rbh
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ACU73711.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenuli
HAD-superfamily hydrolase rbh
13_1_20cm_3_scaffold_104_28
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32111..33442)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QYN1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:CCK26032.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
hypothetical protein
Displaying 28 items

View Taxonomy