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13_1_20cm_3_scaffold_380

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_380_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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3..1526
DNA (1524bp) protein (508aa)
Translation initiation factor IF-2 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX8_CATAD rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.
infB; translation initiation factor IF-2
13_1_20cm_3_scaffold_380_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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1633..1914
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX7_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU76565.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein
13_1_20cm_3_scaffold_380_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1943..2446
DNA (504bp) protein (168aa)
Ribosome-binding factor A n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX6_CATAD
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source
rbfA; ribosome-binding factor A
13_1_20cm_3_scaffold_380_4
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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2451..3377
DNA (927bp) protein (309aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX5_CATAD rbh
tRNA pseudouridine synthase B rbh
13_1_20cm_3_scaffold_380_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3510..4529
DNA (1020bp) protein (340aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=479433 species="Bacteria; Actinobacter
Riboflavin biosynthesis protein RibF n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX4_CATAD rbh
bifunctional riboflavin kinase/FMN adenylyltransferase rbh
13_1_20cm_3_scaffold_380_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5138..5386
DNA (249bp) protein (83aa)
RNA polymerase sigma factor n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX3_CATAD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (str
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_380_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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5393..5674
DNA (282bp) protein (94aa)
Anti-sigma factor n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX2_CATAD
Anti-sigma factor {ECO:0000313|EMBL:ACU76560.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 4492
anti-sigma factor
13_1_20cm_3_scaffold_380_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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5935..7824
DNA (1890bp) protein (630aa)
Metal dependent phosphohydrolase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX1_CATAD rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACU76559.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenul
metal dependent phosphohydrolase rbh
13_1_20cm_3_scaffold_380_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7821..9158
DNA (1338bp) protein (446aa)
Metal dependent phosphohydrolase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDX0_CATAD rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACU76558.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (
metal dependent phosphohydrolase rbh
13_1_20cm_3_scaffold_380_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9271..9486
DNA (216bp) protein (72aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDW9_CATAD
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ACU76557.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenuli
biotin/lipoyl attachment domain-containing protein
13_1_20cm_3_scaffold_380_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9833..10216
DNA (384bp) protein (128aa)
Thioesterase superfamily protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDW7_CATAD
Thioesterase superfamily protein {ECO:0000313|EMBL:ACU76555.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (
thioesterase superfamily protein
13_1_20cm_3_scaffold_380_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10330..12000)
DNA (1671bp) protein (557aa)
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDW4_CATAD rbh
Thiamine pyrophosphate protein domain protein TPP-binding {ECO:0000313|EMBL:ACU76552.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="C
hypothetical protein rbh
13_1_20cm_3_scaffold_380_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12281..13348)
DNA (1068bp) protein (356aa)
Aldo/keto reductase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDW2_CATAD rbh
Aldo/keto reductase {ECO:0000313|EMBL:ACU76550.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44
aldo/keto reductase rbh
13_1_20cm_3_scaffold_380_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13430..14314
DNA (885bp) protein (295aa)
Helix-turn-helix domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDW1_CATAD rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACU76549.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (s
helix-turn-helix domain-containing protein rbh
13_1_20cm_3_scaffold_380_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14289..15302)
DNA (1014bp) protein (338aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=479433 species="Bacteria; Actinoba
biotin synthase (EC:2.8.1.6) rbh
Biotin synthase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDW0_CATAD rbh
13_1_20cm_3_scaffold_380_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15306..16034)
DNA (729bp) protein (243aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
bioD; dithiobiotin synthetase (EC:6.3.3.3) rbh
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDV9_CATAD rbh
13_1_20cm_3_scaffold_380_17
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16093..16887)
DNA (795bp) protein (265aa)
Transcriptional regulator, GntR family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDV8_CATAD rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACU76546.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidip
GntR family transcriptional regulator rbh
13_1_20cm_3_scaffold_380_18
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17313..18344
DNA (1032bp) protein (344aa)
Extracellular solute-binding protein family 1 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDV7_CATAD rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACU76545.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" so
extracellular solute-binding protein rbh
13_1_20cm_3_scaffold_380_19
unknown

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comp(18432..18611)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_3_scaffold_380_20
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18833..19492
DNA (660bp) protein (220aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDV6_CATAD rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACU76544.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;
binding-protein-dependent transporters inner membrane component rbh
Displaying 20 items

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