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13_1_20cm_3_scaffold_5000

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5000_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..251
DNA (249bp) protein (83aa)
AMP-dependent synthetase and ligase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q240_CATAD
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACU77577.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphil
long-chain-fatty-acid--CoA ligase
13_1_20cm_3_scaffold_5000_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

325..927
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q243_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU77580.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
hypothetical protein
13_1_20cm_3_scaffold_5000_3
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1194..1484)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000369586B
Uncharacterized protein {ECO:0000313|EMBL:EXG81936.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
13_1_20cm_3_scaffold_5000_4
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1733..2422
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4NUJ6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ42144.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
13_1_20cm_3_scaffold_5000_5
unknown

Not on your lists

2589..3269
DNA (681bp) protein (227aa)

This feature has no annotations

13_1_20cm_3_scaffold_5000_6
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3892..4482
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FG46_SACEN
TetR family transcriptional regulator {ECO:0000313|EMBL:EQD85506.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolysp
hypothetical protein
13_1_20cm_3_scaffold_5000_7
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4535..7012)
DNA (2478bp) protein (826aa)
radical SAM protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003643955
FO synthase {ECO:0000313|EMBL:AJF65688.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
fbiC; FO synthase rbh
13_1_20cm_3_scaffold_5000_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7042..7848)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q245_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU77582.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_5000_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7883..9019)
DNA (1137bp) protein (379aa)
Luciferase-like monooxygenase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q246_CATAD rbh
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACU77583.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (str
luciferase-like monooxygenase rbh
13_1_20cm_3_scaffold_5000_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9049..9801)
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q247_CATAD rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU77584.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidi
short-chain dehydrogenase/reductase SDR rbh
13_1_20cm_3_scaffold_5000_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10377..10718
DNA (342bp) protein (114aa)
Luciferase-like monooxygenase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q248_CATAD
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACU77585.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (str
luciferase-like monooxygenase
13_1_20cm_3_scaffold_5000_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10735..12402)
DNA (1668bp) protein (556aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q249_CATAD rbh
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:ACU77586.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;"
cell envelope-related transcriptional attenuator rbh
13_1_20cm_3_scaffold_5000_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12395..12880)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q250_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU77587.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
hypothetical protein
13_1_20cm_3_scaffold_5000_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13073..13768)
DNA (696bp) protein (232aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q251_CATAD rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU77588.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidi
short chain dehydrogenase rbh
13_1_20cm_3_scaffold_5000_15
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13928..14314
DNA (387bp) protein (129aa)
GntR family transcriptional regulator n=1 Tax=Amycolatopsis alba RepID=UPI0003742661
GntR family transcriptional regulator {ECO:0000313|EMBL:EME62630.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis deca
ytrA; GntR family transcriptional regulator
13_1_20cm_3_scaffold_5000_16
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14328..15416
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HYR9_9PSEU
Membrane protein, putative {ECO:0000313|EMBL:AJT69349.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
membrane protein, putative
13_1_20cm_3_scaffold_5000_17
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15856..16275
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q253_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU77590.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein
13_1_20cm_3_scaffold_5000_18
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16327..17688)
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q254_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU77591.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_5000_19
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17760..17993)
DNA (234bp) protein (78aa)
Transcriptional regulator n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q255_CATAD
Transcriptional regulator {ECO:0000313|EMBL:ACU77592.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain
transcriptional regulator
13_1_20cm_3_scaffold_5000_20
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18105..19169)
DNA (1065bp) protein (355aa)
Transcriptional regulator n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q255_CATAD rbh
Transcriptional regulator {ECO:0000313|EMBL:ACU77592.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain
transcriptional regulator rbh
13_1_20cm_3_scaffold_5000_21
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19439..20572)
DNA (1134bp) protein (378aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q257_CATAD rbh
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:ACU77594.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" sour
LPXTG-motif cell wall anchor domain-containing protein rbh
13_1_20cm_3_scaffold_5000_22
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20860..21579)
DNA (720bp) protein (240aa)
DtxR family transcriptional regulator n=1 Tax=Streptomyces scabrisporus RepID=UPI00037C5464
DtxR family transcriptional regulator {ECO:0000313|EMBL:EST39438.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-0
DtxR family iron (metal) dependent repressor
13_1_20cm_3_scaffold_5000_23
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21944..22612
DNA (669bp) protein (223aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q262_CATAD rbh
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ACU77599.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila
uracil-DNA glycosylase superfamily rbh
13_1_20cm_3_scaffold_5000_24
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22626..23372
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q263_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU77600.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_5000_25
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23362..24057)
DNA (696bp) protein (232aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5) rbh
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q264_CATAD rbh
13_1_20cm_3_scaffold_5000_26
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24230..25366
DNA (1137bp) protein (379aa)
Citrate (Si)-synthase {ECO:0000313|EMBL:ACU77602.1}; EC=2.3.3.1 {ECO:0000313|EMBL:ACU77602.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" so
citrate synthase 2 (EC:2.3.3.1) rbh
Citrate (Si)-synthase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q265_CATAD rbh
13_1_20cm_3_scaffold_5000_27
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25553..26674
DNA (1122bp) protein (374aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulis
Phosphoserine aminotransferase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q268_CATAD rbh
phosphoserine aminotransferase rbh
13_1_20cm_3_scaffold_5000_28
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26824..27105)
DNA (282bp) protein (94aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=479433 species="Ba
2'-5' RNA ligase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q269_CATAD
2'-5' RNA ligase
Displaying 28 items

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