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13_1_20cm_3_scaffold_19909

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_19909_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..2096)
DNA (2094bp) protein (698aa)
Penicillin-binding protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6APC4_9PROT
Penicillin-binding protein {ECO:0000313|EMBL:BAN36739.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella d
penicillin-binding protein
13_1_20cm_3_scaffold_19909_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2394..2624)
DNA (231bp) protein (77aa)
3-beta-hydroxy-delta(5)-steroid dehydrogenase (EC:1.1.1.145)
3-beta-hydroxy-delta(5)-steroid dehydrogenase n=2 Tax=Rhodospirillum rubrum RepID=G2TFN0_RHORU
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
13_1_20cm_3_scaffold_19909_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2606..3241)
DNA (636bp) protein (212aa)
UPI0003D00817 related cluster n=1 Tax=unknown RepID=UPI0003D00817
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_19909_4
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3719..4309
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D4P2_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EFI62037.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
hypothetical protein
13_1_20cm_3_scaffold_19909_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4463..4897)
DNA (435bp) protein (145aa)
Ribonuclease VapC n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NRE2_9DELT
PilT protein domain protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PilT protein-like protein
13_1_20cm_3_scaffold_19909_6
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4888..5139)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE20 RepID=UPI0003771EAF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
13_1_20cm_3_scaffold_19909_7
unknown

Not on your lists

comp(5266..5487)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_3_scaffold_19909_8
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5468..6781)
DNA (1314bp) protein (438aa)
TRAP-type uncharacterized transport system, periplasmic component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLP0_AZOSU
TRAP-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:AEV25630.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azos
TRAP-type transport system, periplasmic protein
13_1_20cm_3_scaffold_19909_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7031..7258)
DNA (228bp) protein (76aa)
4-oxalocrotonate tautomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJS6_9BACT
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:EEF59952.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
4-oxalocrotonate tautomerase
13_1_20cm_3_scaffold_19909_10
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7293..8309)
DNA (1017bp) protein (339aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAQ0_ANASK rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACG74569.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacterac
alcohol dehydrogenase zinc-binding domain-containing protein
13_1_20cm_3_scaffold_19909_11
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(8418..8519)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B013_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIQ00605.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
13_1_20cm_3_scaffold_19909_12
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8818..9510)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WBL1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EJN16137.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
4-carboxymuconolactone decarboxylase
13_1_20cm_3_scaffold_19909_13
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9910..10527
DNA (618bp) protein (206aa)
transcriptional regulator, LysR family (EC:4.2.1.1)
Putative transcriptional regulatory protein,LysR family OprD regulatory protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F992_9RHIZ
Putative transcriptional regulatory protein,LysR family OprD regulatory protein {ECO:0000313|EMBL:CCV12861.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllo
Displaying 13 items

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