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13_1_20cm_3_scaffold_3043

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3043_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1..969
DNA (969bp) protein (323aa)
ribonuclease II; K01147 exoribonuclease II [EC:3.1.13.1] Tax=CG_Rhodocyc_01
Ribonuclease II n=1 Tax=Thauera terpenica 58Eu RepID=S9ZH46_9RHOO
ribonuclease II
13_1_20cm_3_scaffold_3043_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1047..2060
DNA (1014bp) protein (338aa)
TonB family protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GK50_NITSI
TonB family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
TonB family protein
13_1_20cm_3_scaffold_3043_3
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2161..2982
DNA (822bp) protein (274aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=Thauera sp. 27 RepID=N6YKZ8_9RHOO
aroE; shikimate 5-dehydrogenase
13_1_20cm_3_scaffold_3043_4
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2987..3682
DNA (696bp) protein (232aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWA2_Gallionellales_60_18_curated
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9F9_9PROT
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
13_1_20cm_3_scaffold_3043_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3761..4357
DNA (597bp) protein (199aa)
Sigma-70 region 2:Sigma-70 region 4 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IQ3_DECAR
rpoE8; ECF subfamily RNA polymerase sigma factor Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
sigma-70 region 2:sigma-70 region 4
13_1_20cm_3_scaffold_3043_6
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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4354..5160
DNA (807bp) protein (269aa)
Transmembrane transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHN1_9PROT
Transmembrane transcriptional regulator {ECO:0000313|EMBL:BAN34034.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="S
transmembrane transcriptional regulator
13_1_20cm_3_scaffold_3043_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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5261..6427
DNA (1167bp) protein (389aa)
D-3-hydroxyaspartate aldolase (EC:4.1.3.-)
D-3-hydroxyaspartate aldolase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121U6_POLSJ rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
13_1_20cm_3_scaffold_3043_8
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7008..7394)
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZJI2_9PROT
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_3_scaffold_3043_9
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7425..8378)
DNA (954bp) protein (318aa)
polyhydroxyalkanoic acid depolymerase (EC:3.1.1.-)
Esterase, PHB depolymerase family n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HWI6_9BURK
Esterase, PHB depolymerase family {ECO:0000313|EMBL:EJN07738.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herba
13_1_20cm_3_scaffold_3043_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8455..9915)
DNA (1461bp) protein (487aa)
ribonuclease, Rne/Rng family; K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ribonuclease G (EC:3.1.4.-)
Ribonuclease G n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADZ3_9PROT rbh
Displaying 10 items

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