ggKbase home page

13_1_20cm_3_scaffold_3343

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3343_1
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..425)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003155884
Transcriptional regulator {ECO:0000313|EMBL:EKM98561.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp.
DeoR faimly transcriptional regulator
13_1_20cm_3_scaffold_3343_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

622..1629
DNA (1008bp) protein (336aa)
Short chain dehydrogenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUQ2_9PROT
Short chain dehydrogenase {ECO:0000313|EMBL:EKM98562.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp.
rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
13_1_20cm_3_scaffold_3343_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1622..2653
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031878F3
Short chain dehydrogenase {ECO:0000313|EMBL:EKM98562.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp.
short chain dehydrogenase
13_1_20cm_3_scaffold_3343_4
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2700..3980
DNA (1281bp) protein (427aa)
putative sugar isomerase (EC:5.3.1.-)
Sugar isomerase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YSN1_9RHIZ rbh
Sugar isomerase {ECO:0000313|EMBL:ERI15077.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
13_1_20cm_3_scaffold_3343_5
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

4147..4614
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037955BA
RutC family protein PH0854; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM
hypothetical protein
13_1_20cm_3_scaffold_3343_6

Not on your lists

4660..5544
DNA (885bp) protein (295aa)
Dienelactone hydrolase n=1 Tax=mine drainage metagenome RepID=T1CIK0_9ZZZZ
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EQD70091.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_20cm_3_scaffold_3343_7
unknown

Not on your lists

comp(5635..5907)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_3_scaffold_3343_8
unknown

Not on your lists

comp(5894..6328)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_3_scaffold_3343_9
unknown

Not on your lists

comp(6563..6814)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_20cm_3_scaffold_3343_10
unknown

Not on your lists

comp(6905..7423)
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_20cm_3_scaffold_3343_11
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7842..8996
DNA (1155bp) protein (385aa)
SGNH hydrolase n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3E454_9ACTO
SGNH hydrolase {ECO:0000313|EMBL:EMF28652.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
putative secreted protein
13_1_20cm_3_scaffold_3343_12
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9140..10297
DNA (1158bp) protein (386aa)
Major facilitator superfamily transporter n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XLQ8_9ALTE
Major facilitator superfamily transporter {ECO:0000313|EMBL:GAC21594.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" sourc
hypothetical protein
Displaying 12 items

View Taxonomy