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13_1_20cm_3_scaffold_3758

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3758_1
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1083)
DNA (1083bp) protein (361aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFX2_GALCS
hisS; histidyl-tRNA synthetase
13_1_20cm_3_scaffold_3758_2
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1101..2105)
DNA (1005bp) protein (335aa)
gcpE; 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
gcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DB4244
13_1_20cm_3_scaffold_3758_3
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2363..3295)
DNA (933bp) protein (311aa)
Transcriptional regulator n=1 Tax=Thauera sp. 27 RepID=N6X9M1_9RHOO
Transcriptional regulator {ECO:0000313|EMBL:ENO76005.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
transcriptional regulator
13_1_20cm_3_scaffold_3758_4
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3292..4098)
DNA (807bp) protein (269aa)
Type IV pilus biogenesis/stability protein PilW n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QI73_AZOSU
type IV pilus biogenesis/stability protein PilW Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
type IV pilus biogenesis/stability protein PilW
13_1_20cm_3_scaffold_3758_5
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4102..5208)
DNA (1107bp) protein (369aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
50S rRNA methyltransferase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003605A45 rbh
hypothetical protein
13_1_20cm_3_scaffold_3758_6
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5282..5713)
DNA (432bp) protein (144aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
ndk; nucleoside-diphosphate kinase (EC:2.7.4.6)
nucleoside diphosphate kinase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E42DDA
13_1_20cm_3_scaffold_3758_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5889..6278)
DNA (390bp) protein (130aa)
VanZ family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9C6_9PROT
VanZ family protein {ECO:0000313|EMBL:BAN33875.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrif
VanZ family protein
13_1_20cm_3_scaffold_3758_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6304..7677)
DNA (1374bp) protein (458aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D7E2_LARHH rbh
TRAP dicarboxylate transporter, DctM subunit; K11690 C4-dicarboxylate transporter, DctM subunit Tax=CG_Rhodocyc_01
TRAP dicarboxylate transporter, DctM subunit precursor
13_1_20cm_3_scaffold_3758_9
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7674..8294)
DNA (621bp) protein (207aa)
TRAP C4-dicarboxylate transport system, small permease component DctQ n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PGF1_9BURK
TRAP C4-dicarboxylate transport system, small permease component DctQ {ECO:0000313|EMBL:ELX10684.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacterac
tripartite ATP-independent periplasmic transporters, DctQ component family protein
13_1_20cm_3_scaffold_3758_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8389..9387)
DNA (999bp) protein (333aa)
C4-dicarboxylate-binding periplasmic protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IGZ1_BORPD
TRAP dicarboxylate transporter subunit DctP; K11688 C4-dicarboxylate-binding protein DctP Tax=CG_Rhodocyc_01
C4-dicarboxylate-binding periplasmic protein
13_1_20cm_3_scaffold_3758_11
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9546..10991)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037898AB
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
13_1_20cm_3_scaffold_3758_12
unknown

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comp(11032..11100)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 12 items

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