ggKbase home page

13_1_20cm_3_scaffold_4966

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4966_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..493
DNA (492bp) protein (164aa)
UPI0003CEC7F6 related cluster n=1 Tax=unknown RepID=UPI0003CEC7F6
Aldehyde dehydrogenase {ECO:0000313|EMBL:ESY68304.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
aldehyde dehydrogenase
13_1_20cm_3_scaffold_4966_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

524..1135
DNA (612bp) protein (204aa)
Uracil-DNA glycosylase protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2C4_RAMTT
DNA polymerase {ECO:0000313|EMBL:AGP34963.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum
DNA polymerase
13_1_20cm_3_scaffold_4966_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1262..2269
DNA (1008bp) protein (336aa)
Thioredoxin-related protein-like protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5Y9_LEPCP rbh
thioredoxin-like protein Tax=CG_Rhodocyc_01
thioredoxin-like protein
13_1_20cm_3_scaffold_4966_4
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2302..3132)
DNA (831bp) protein (277aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQ49_9RHIZ rbh
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJN02451.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
multiple sugar transport system permease protein
13_1_20cm_3_scaffold_4966_5
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3129..3986)
DNA (858bp) protein (286aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000381686F rbh
ABC transporter permease {ECO:0000313|EMBL:KJR64576.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum t
binding-protein-dependent transport systems inner membrane component
13_1_20cm_3_scaffold_4966_6
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4133..5278)
DNA (1146bp) protein (382aa)
Extracellular solute-binding n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P341_AZOS1 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJR64575.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" sourc
extracellular solute-binding
13_1_20cm_3_scaffold_4966_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5288..6343)
DNA (1056bp) protein (352aa)
Spermidine/putrescine transport system ATP-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P340_AZOS1 rbh
Spermidine/putrescine transport system ATP-binding protein {ECO:0000313|EMBL:BAI75210.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azos
potA; spermidine/putrescine transport system ATP-binding protein
13_1_20cm_3_scaffold_4966_8
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6700..7521
DNA (822bp) protein (274aa)
ABC-type phosphate/phosphonate transport system periplasmic component-like protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CUD4_VARPS
ABC-type phosphate/phosphonate transport system periplasmic component-like protein Tax=GWA2_Curvibacter_64_110_curated
ABC-type phosphate/phosphonate transport system periplasmic component-like protein
13_1_20cm_3_scaffold_4966_9
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7543..7995)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030E0435
Uncharacterized protein {ECO:0000313|EMBL:EGF31369.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9
hypothetical protein
13_1_20cm_3_scaffold_4966_10
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8194..8982
DNA (789bp) protein (263aa)
Putative lytic transglycosylase n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LKC9_RALME
Putative lytic transglycosylase {ECO:0000313|EMBL:ABF09397.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia m
putative lytic transglycosylase
13_1_20cm_3_scaffold_4966_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9195..9884)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZC41_9GAMM
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
LysR family transcriptional regulator
13_1_20cm_3_scaffold_4966_12
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9886..10539)
DNA (654bp) protein (218aa)
Zinc-type alcohol dehydrogenase transmembrane protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WYF5_9BURK rbh
Zinc-type alcohol dehydrogenase transmembrane protein {ECO:0000313|EMBL:BAN26515.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia
zinc-type alcohol dehydrogenase transmembrane protein
13_1_20cm_3_scaffold_4966_13
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10967..12598)
DNA (1632bp) protein (544aa)
Acetolactate synthase n=1 Tax=Methylophaga lonarensis MPL RepID=M7P1N7_9GAMM rbh
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_20cm_3_scaffold_4966_14
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12736..13572
DNA (837bp) protein (279aa)
Uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DHS3_METS0 rbh
Uroporphyrinogen III synthase HEM4
13_1_20cm_3_scaffold_4966_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13583..13720)
DNA (138bp) protein (46aa)
4,5-dihydroxyphthalate decarboxylase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G6E1_9BURK
4,5-dihydroxyphthalate decarboxylase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
4,5-dihydroxyphthalate decarboxylase
Displaying 15 items

View Taxonomy