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13_1_20cm_3_scaffold_503

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_503_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

13_1_20cm_3_scaffold_503_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(171..1007)
DNA (837bp) protein (279aa)
UPF0042 nucleotide-binding protein Nmul_A0081 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Y081_NITMU rbh
Nucleotide-binding protein Nmul_A0081 {ECO:0000255|HAMAP-Rule:MF_00636}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source
hypothetical protein
13_1_20cm_3_scaffold_503_3
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1100..2059)
DNA (960bp) protein (320aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HPr kinase/phosphorylase (EC:2.7.11.-)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036AFB40 rbh
13_1_20cm_3_scaffold_503_4
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2056..2439)
DNA (384bp) protein (128aa)
ptsN; protein-Npi-phosphohistidine-sugar phosphotransferase (EC:2.7.1.69); K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
ptsN; PTS system, nitrogen regulatory IIA protein (EC:2.7.1.69)
Nitrogen regulatory IIA protein n=2 Tax=Bordetella holmesii RepID=M5NIX4_9BORD
13_1_20cm_3_scaffold_503_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2552..2905)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000369BF5A
ribosomal subunit Interface protein; K05808 putative sigma-54 modulation protein Tax=RBG_16_Betaproteobacteria_58_11_curated
sigma 54 modulation protein/ribosomal protein s30ea
13_1_20cm_3_scaffold_503_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2978..4417)
DNA (1440bp) protein (480aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor id=12497753 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
RNA polymerase factor sigma-54 (EC:2.7.7.6)
13_1_20cm_3_scaffold_503_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4440..5174)
DNA (735bp) protein (245aa)
ABC transporter-like protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ATP-binding ABC transporter protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YRM2_9RHOO rbh
ABC transporter
13_1_20cm_3_scaffold_503_8
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5171..5833)
DNA (663bp) protein (221aa)
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=RBG_16_Gallionellales_56_9_curated
OstA-like family protein; K09774 lipopolysaccharide export system protein LptA id=12495138 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
OstA-like family protein
13_1_20cm_3_scaffold_503_9
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5838..6437)
DNA (600bp) protein (200aa)
hypothetical protein Tax=CG_Beta_01
Putative uncharacterized protein id=1915013 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
13_1_20cm_3_scaffold_503_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6434..6964)
DNA (531bp) protein (177aa)
phosphatase KdsC; K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=CG_Hydro_01
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Methylotenera RepID=UPI000363FEC4
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
13_1_20cm_3_scaffold_503_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6984..8003)
DNA (1020bp) protein (340aa)
arabinose-5-phosphate isomerase (EC:5.3.1.13) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
KpsF/GutQ family protein n=2 Tax=Pandoraea RepID=V5UFM6_9BURK rbh
KpsF/GutQ family protein
13_1_20cm_3_scaffold_503_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8091..10055
DNA (1965bp) protein (655aa)
Potassium efflux system protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9N3_9PROT
Potassium efflux system protein {ECO:0000313|EMBL:BAN34410.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfurice
potassium efflux system protein
13_1_20cm_3_scaffold_503_13
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10319..11185
DNA (867bp) protein (289aa)
ABC transporter related n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLS4_ACCPU rbh
ABC transporter related {ECO:0000313|EMBL:ACV33968.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).
ABC transporter
13_1_20cm_3_scaffold_503_14
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11185..11997
DNA (813bp) protein (271aa)
ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000378D033
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein
13_1_20cm_3_scaffold_503_15
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11994..12464
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6YAV0_9RHOO
hypothetical protein; K02067 putative ABC transport system substrate-binding protein Tax=GWA2_Rhodocyclales_65_20_curated
ABC transporter substrate-binding protein
13_1_20cm_3_scaffold_503_16
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12461..13168
DNA (708bp) protein (236aa)
ABC transporter n=1 Tax=Methyloversatilis universalis RepID=UPI00036753AB
Putative lipoprotein {ECO:0000313|EMBL:EGK71034.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis u
VacJ-like lipoprotein
13_1_20cm_3_scaffold_503_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13297..13869
DNA (573bp) protein (191aa)
Toluene tolerance protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RDQ4_9RHOO
organic solvent resistance ABC transporter auxiliary protein; K07323 putative toluene tolerance protein Tax=CG_Rhodocyc_01
ttg2D; putative toluene tolerance protein
13_1_20cm_3_scaffold_503_18
unknown

Not on your lists

13866..14006
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 18 items

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