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13_1_20cm_3_scaffold_8173

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_8173_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..492)
DNA (492bp) protein (164aa)
2-hydroxy-acid oxidase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00036EA827
mdlB; (S)-mandelate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
FMN-dependent family dehydrogenase
13_1_20cm_3_scaffold_8173_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(570..830)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031A6BC6
tctC; extracytoplasmic binding receptor Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_1_20cm_3_scaffold_8173_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(802..1461)
DNA (660bp) protein (220aa)
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FW4_POLSJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
13_1_20cm_3_scaffold_8173_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2008..2319
DNA (312bp) protein (104aa)
Probable UDP-glucose 4-epimerase protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZK3_POLGS
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
UDP-glucose 4-epimerase
13_1_20cm_3_scaffold_8173_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2288..3958
DNA (1671bp) protein (557aa)
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBF1_SPHWW rbh
13_1_20cm_3_scaffold_8173_6

Not on your lists

3962..4765
DNA (804bp) protein (268aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V7W2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKM59315.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hydrolase, alpha/beta fold family
13_1_20cm_3_scaffold_8173_7
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4762..5226
DNA (465bp) protein (155aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1121014 species="Ba
inorganic pyrophosphatase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B50439
inorganic diphosphatase
13_1_20cm_3_scaffold_8173_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5228..6652)
DNA (1425bp) protein (475aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SSN4_PSYIN
putative TRAP-type C4-dicarboxylate transport system, large permease component Tax=RBG_16_Betaproteobacteria_66_20_curated
TRAP dicarboxylate transporter subunit DctM
13_1_20cm_3_scaffold_8173_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6660..7166)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FL61_PELBH
hypothetical protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
13_1_20cm_3_scaffold_8173_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7150..7947)
DNA (798bp) protein (266aa)
Trap dicarboxylate transporter-dctp subunit n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBQ4_9RHOB
extracellular solute-binding protein Tax=RBG_16_Betaproteobacteria_66_20_curated
C4-dicarboxylate ABC transporter substrate-binding protein
13_1_20cm_3_scaffold_8173_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8303..8590
DNA (288bp) protein (96aa)
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00035E94EA
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
histone-like DNA-binding protein
13_1_20cm_3_scaffold_8173_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8709..9287
DNA (579bp) protein (193aa)
Restriction endonuclease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFM0_AZOSU
putative nuclease Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative nuclease
13_1_20cm_3_scaffold_8173_13
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9346..10287
DNA (942bp) protein (314aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUC8_JANMA rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
hypothetical protein
13_1_20cm_3_scaffold_8173_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10277..10885
DNA (609bp) protein (203aa)
HhH-GPD; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
HhH-GPD family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YI82_9BURK
DNA-3-methyladenine glucosyllase II
13_1_20cm_3_scaffold_8173_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10912..12039
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZIS8_PSEAC
response regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
diguanylate cyclase
13_1_20cm_3_scaffold_8173_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12054..12539
DNA (486bp) protein (162aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Methyloversatilis universalis RepID=UPI0003726CD0
Displaying 16 items

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