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13_1_20cm_3_scaffold_9898

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_9898_1
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..846
DNA (846bp) protein (282aa)
adenylate/guanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Adenylate/guanylate cyclase id=3112748 bin=GWC2_Methylomirabilis_70_16 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenylate/guanylate cyclase
13_1_20cm_3_scaffold_9898_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1047..1466
DNA (420bp) protein (140aa)
rubrerythrin n=1 Tax=Rhodocyclaceae RepID=UPI000361AF9E
rubrerythrin Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
rubrerythrin
13_1_20cm_3_scaffold_9898_3
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1643..3001
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035C138C
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Fe-S oxidoreductase
13_1_20cm_3_scaffold_9898_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3014..3604
DNA (591bp) protein (197aa)
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
Putative uncharacterized protein id=1353830 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
13_1_20cm_3_scaffold_9898_5
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3639..4193)
DNA (555bp) protein (185aa)
GCN5-related N-acetyltransferase (EC:2.3.1.128)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00037B9AF3
Tax=BJP_S1_SUB10_Methanoculleus_61_9
13_1_20cm_3_scaffold_9898_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4219..4704)
DNA (486bp) protein (162aa)
UPF0234 protein C266_17095 n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WZ96_9BURK
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
nucleotide-binding protein
13_1_20cm_3_scaffold_9898_7

Not on your lists

comp(4735..4980)
DNA (246bp) protein (82aa)
Argininosuccinate synthase {ECO:0000313|EMBL:CBI10914.1}; EC=6.3.4.5 {ECO:0000313|EMBL:CBI10914.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine d
Argininosuccinate synthase n=1 Tax=mine drainage metagenome RepID=E6QUJ1_9ZZZZ
argG; argininosuccinate synthase
13_1_20cm_3_scaffold_9898_8
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5016..5780)
DNA (765bp) protein (255aa)
argininosuccinate synthase (EC:6.3.4.5) Tax=RBG_16_Betaproteobacteria_58_11_curated
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=2 Tax=Proteobacteria RepID=M5DIN4_9PROT
13_1_20cm_3_scaffold_9898_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5824..6798)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DF4706 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative Bug-like extra cytoplasmic solute receptor, TTT family
13_1_20cm_3_scaffold_9898_10
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6814..7179)
DNA (366bp) protein (122aa)
Lactoylglutathione lyase protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IX21_HERSS
Lactoylglutathione lyase protein {ECO:0000313|EMBL:ADJ66058.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbasp
gloA; lactoylglutathione lyase
13_1_20cm_3_scaffold_9898_11
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7203..8111)
DNA (909bp) protein (303aa)
Ornithine carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000255|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000255|HAMAP-Rule:MF_01109};; TaxID=76114 species="Bacteria; Proteob
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=OTC_AROAE
13_1_20cm_3_scaffold_9898_12
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8410..8673)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Leeia oryzae RepID=UPI00037EBE88
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp.
rpsT; 30S ribosomal subunit protein S20
13_1_20cm_3_scaffold_9898_13
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8937..10475
DNA (1539bp) protein (513aa)
Integral membrane protein MviN n=2 Tax=Thauera RepID=N6YT52_9RHOO
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
integral membrane protein MviN
13_1_20cm_3_scaffold_9898_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10422..10694)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035D0228
Uncharacterized protein {ECO:0000313|EMBL:ACS19471.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
hypothetical protein
13_1_20cm_3_scaffold_9898_15
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10728..11168)
DNA (441bp) protein (147aa)
Ferric uptake regulator, Fur family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKR7_ACCPU
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ACV36987.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (s
Fur family ferric uptake regulator
13_1_20cm_3_scaffold_9898_16
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11256..11708
DNA (453bp) protein (151aa)
Outer membrane protein assembly factor BamE n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D7I0_LARHH
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae;
smpA; SmpA/OmlA
13_1_20cm_3_scaffold_9898_17
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11759..12076
DNA (318bp) protein (106aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RBG_16_Betaproteobacteria_56_24_curated
dapB; dihydrodipicolinate reductase DapB (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HK94_9BURK
13_1_20cm_3_scaffold_9898_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12015..12458
DNA (444bp) protein (148aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; TaxID=292415 spec
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=DAPB_THIDA
13_1_20cm_3_scaffold_9898_19
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12485..13255
DNA (771bp) protein (257aa)
gno; Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) (EC:1.1.1.69)
gluconate 5-dehydrogenase n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI0002884467 rbh
Gluconate 5-dehydrogenase (5-keto-d-gluconate 5-reductase) {ECO:0000313|EMBL:EJF72232.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseud
13_1_20cm_3_scaffold_9898_20
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13406..14560
DNA (1155bp) protein (385aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5R824_9RHOO
carbamoyl-phosphate synthase small subunit
13_1_20cm_3_scaffold_9898_21
unknown

Not on your lists

14557..14622
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 21 items

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