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13_1_20cm_3_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_25_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3..800)
DNA (798bp) protein (266aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CDM65366.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CDM65366.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacte
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPW2_KORVE
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
13_1_20cm_3_scaffold_25_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(787..1710)
DNA (924bp) protein (308aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=DAPA_KORVE
dihydrodipicolinate synthase
13_1_20cm_3_scaffold_25_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1711..2421)
DNA (711bp) protein (237aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Py
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R26_SOLUE
13_1_20cm_3_scaffold_25_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2699..3703)
DNA (1005bp) protein (335aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:CDM65369.1}; EC=3.5.1.16 {ECO:0000313|EMBL:CDM65369.1};; TaxID=454194 species="Bacteria; Acidobacteri
peptidase dimerization domain-containing protein; K01438 acetylornithine deacetylase [EC:3.5.1.16] id=12554321 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase dimerisation
13_1_20cm_3_scaffold_25_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3858..5246)
DNA (1389bp) protein (463aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
Aspartokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INQ8_KORVE
aspartate kinase
13_1_20cm_3_scaffold_25_6
unknown

Not on your lists

5320..5448
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_3_scaffold_25_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(5825..9727)
DNA (3903bp) protein (1301aa)
TonB-dependent receptor, plug n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029C2_SOLUE rbh
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABJ82369.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
TonB-dependent receptor, plug
13_1_20cm_3_scaffold_25_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10497..14258
DNA (3762bp) protein (1254aa)
Cna protein B-type domain, TonB-dependent Receptor Plug Domain, TonB dependent receptor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEQ0_CHLTF rbh
Carboxypeptidase regulatory-like domain {ECO:0000313|EMBL:CDM64869.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogene
Cna protein B-type domain, TonB-dependent Receptor Plug Domain, TonB dependent receptor rbh
13_1_20cm_3_scaffold_25_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14384..15490
DNA (1107bp) protein (369aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=454194 species=
nagA; N-acetylglucosamine-6-phosphate deacetylase (nagA) (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase (NagA) n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A3T1_THEGJ
13_1_20cm_3_scaffold_25_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15843..17189)
DNA (1347bp) protein (449aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogene
glcF; glycolate oxidase iron-sulfur subunit
13_1_20cm_3_scaffold_25_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17316..18887)
DNA (1572bp) protein (524aa)
Gamma-glutamyltransferase 1 {ECO:0000313|EMBL:CDM64973.1}; EC=2.3.2.2 {ECO:0000313|EMBL:CDM64973.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source=
gamma-glutamyltransferase 1 (EC:2.3.2.2)
Gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK88_CHLTF
13_1_20cm_3_scaffold_25_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19109..21928)
DNA (2820bp) protein (940aa)
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:CDM64313.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
FAD linked oxidase domain protein id=3874887 bin=GWC2_Methylomirabilis_70_24 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
FAD linked oxidase domain protein
13_1_20cm_3_scaffold_25_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22087..23727
DNA (1641bp) protein (547aa)
Predicted TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:CDM64314.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyl
Putative metal-dependent hydrolase; K07047 id=17257035 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
amidohydrolase 3
13_1_20cm_3_scaffold_25_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23922..24890
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHB2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEF60747.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
hypothetical protein
13_1_20cm_3_scaffold_25_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25089..26168
DNA (1080bp) protein (360aa)
Mechanosensitive ion channel MscS n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTL3_9GAMM
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EIL90554.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhoda
mechanosensitive ion channel protein MscS
13_1_20cm_3_scaffold_25_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

26470..26958
DNA (489bp) protein (163aa)
Biopolymer transport protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE5_CHLTF
Biopolymer transport protein {ECO:0000313|EMBL:CDM64998.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
biopolymer transport protein
13_1_20cm_3_scaffold_25_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27064..27792)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC74_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDM64563.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_25_18

Not on your lists

comp(28004..29230)
DNA (1227bp) protein (409aa)
Lipolytic protein G-D-S-L family n=1 Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QLZ1_CYAP0
GDSL-like Lipase/Acylhydrolase family {ECO:0000313|EMBL:AIA19133.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
G-D-S-L family lipolytic protein
13_1_20cm_3_scaffold_25_19
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

29375..29662
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UQX9_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:AFY96654.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
hypothetical protein
13_1_20cm_3_scaffold_25_20
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29659..30066
DNA (408bp) protein (136aa)
Transcriptional regulator, XRE family n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PJE2_9CYAN
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AFY33273.1}; TaxID=99598 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
Xre family transcriptional regulator
13_1_20cm_3_scaffold_25_21
unknown

Not on your lists

30075..30224
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_3_scaffold_25_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(30621..31799)
DNA (1179bp) protein (393aa)
FAD dependent oxidoreductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027F6_SOLUE
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABJ82857.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter us
FAD dependent oxidoreductase
13_1_20cm_3_scaffold_25_23
unknown

Not on your lists

comp(31840..32184)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_3_scaffold_25_24

Not on your lists

32734..35931
DNA (3198bp) protein (1066aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN41233.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyl hydrolase BNR repeat-containing protein
13_1_20cm_3_scaffold_25_25
unknown

Not on your lists

comp(36196..36801)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_20cm_3_scaffold_25_26
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36798..37715)
DNA (918bp) protein (306aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SQQ7_HAHCH
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:ABC27017.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hah
hypothetical protein
13_1_20cm_3_scaffold_25_27
unknown

Not on your lists

comp(37871..38209)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_20cm_3_scaffold_25_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(39011..40321)
DNA (1311bp) protein (437aa)
Protein kinase domain with FHA domain n=2 Tax=Singulisphaera acidiphila RepID=L0D830_SINAD
Protein kinase domain with FHA domain {ECO:0000313|EMBL:AGA24978.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sing
protein kinase domain with FHA domain
13_1_20cm_3_scaffold_25_29
unknown

Not on your lists

comp(40424..41455)
DNA (1032bp) protein (344aa)

This feature has no annotations

13_1_20cm_3_scaffold_25_30
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(41636..43297)
DNA (1662bp) protein (554aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:AEP11813.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AEP11813.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacteri
serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH71_CHLTF
Displaying items 1-30 of 139 in total

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