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13_1_20cm_3_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_26_1
unknown

Not on your lists

comp(3..455)
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_20cm_3_scaffold_26_2
unknown

Not on your lists

696..1247
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_20cm_3_scaffold_26_3
RLO_PLX_64_10, Bacteria

Not on your lists

1250..3007
DNA (1758bp) protein (586aa)
translocation protein TolB n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
periplasmic component of the Tol biopolymer transport system
13_1_20cm_3_scaffold_26_4
unknown

Not on your lists

3252..3614
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_20cm_3_scaffold_26_trna_1
unknown

Not on your lists

3933..4006
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_26_5
unknown

Not on your lists

comp(3966..4430)
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_20cm_3_scaffold_26_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4692..5669
DNA (978bp) protein (326aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinom
hemB; Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPN3_9BACT
13_1_20cm_3_scaffold_26_7
unknown

Not on your lists

comp(5742..6650)
DNA (909bp) protein (303aa)

This feature has no annotations

13_1_20cm_3_scaffold_26_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6640..7482)
DNA (843bp) protein (281aa)
Glycoside hydrolase family 5 protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) RepID=C1MSI8_MICPC
Endo-1,4-beta-mannosidase {ECO:0000313|EMBL:AKF04963.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sanda
beta-mannosidase
13_1_20cm_3_scaffold_26_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7529..7879)
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64859.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_26_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8592..8801)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64860.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_26_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9117..11030)
DNA (1914bp) protein (638aa)
Selenocysteine-specific translation elongation factor SelB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S0_SOLUE
Selenocysteine-specific translation elongation factor SelB {ECO:0000313|EMBL:CDM64861.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas
selenocysteine-specific translation elongation factor SelB
13_1_20cm_3_scaffold_26_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11133..13424)
DNA (2292bp) protein (764aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZQ0_SOLUE
von Willebrand factor type A domain {ECO:0000313|EMBL:CDM64862.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_26_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13505..15778)
DNA (2274bp) protein (758aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZQ0_SOLUE
von Willebrand factor type A domain {ECO:0000313|EMBL:CDM64862.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_26_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15939..16385
DNA (447bp) protein (149aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomona
FKBP-type peptidyl-prolyl cis-trans isomerase 2 (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NV76_9BACT
13_1_20cm_3_scaffold_26_15
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16529..18415)
DNA (1887bp) protein (629aa)
RNA-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FIP7_9RHIZ rbh
RNA-binding protein {ECO:0000313|EMBL:ESX78684.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSH
hypothetical protein
13_1_20cm_3_scaffold_26_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18479..19189)
DNA (711bp) protein (237aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000380276C
HhH-GPD family protein
13_1_20cm_3_scaffold_26_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19564..20820)
DNA (1257bp) protein (419aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
PAS domain S-box protein (EC:2.7.13.3)
Alkaline phosphatase synthesis sensor protein PhoR n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJW6_9BACT
13_1_20cm_3_scaffold_26_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20825..21547)
DNA (723bp) protein (241aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFB4_CHLTF
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:CDM66320.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain-containing protein
13_1_20cm_3_scaffold_26_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21652..22311)
DNA (660bp) protein (220aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJW4_9BACT
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
phosphate transport system regulatory protein PhoU
13_1_20cm_3_scaffold_26_20
unknown

Not on your lists

comp(22669..24345)
DNA (1677bp) protein (559aa)

This feature has no annotations

13_1_20cm_3_scaffold_26_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(24700..25824)
DNA (1125bp) protein (375aa)
Glycosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKF9_CHLTF
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA {ECO:0000313|EMBL:CDM65317.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methy
glycosyltransferase
13_1_20cm_3_scaffold_26_22

Not on your lists

26288..26824
DNA (537bp) protein (179aa)
Nitrogen-fixing NifU-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB63_NITMU
Scaffold protein Nfu/NifU N terminal {ECO:0000313|EMBL:AIA14273.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nitrogen-fixing NifU-like
13_1_20cm_3_scaffold_26_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

27132..28136
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UPN7_TANFA
Uncharacterized protein {ECO:0000313|EMBL:CDM65873.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_26_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

28261..30198
DNA (1938bp) protein (646aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SH80_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM65599.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_26_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(30278..31024)
DNA (747bp) protein (249aa)
LmbE family protein n=1 Tax=uncultured organism MedDCM-OCT-S04-C138 RepID=D6PJV9_9ZZZZ
Bacillithiol biosynthesis deacetylase BshB1 {ECO:0000313|EMBL:CDM65315.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphato
lmbe family protein
13_1_20cm_3_scaffold_26_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

31289..32092
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=uncultured organism MedDCM-OCT-S04-C138 RepID=D6PJW0_9ZZZZ
Metal-dependent hydrolase, beta-lactamase superfamily III {ECO:0000313|EMBL:CDM65312.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas
hypothetical protein
13_1_20cm_3_scaffold_26_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

32124..33062
DNA (939bp) protein (313aa)
Metal-dependent hydrolase {ECO:0000313|EMBL:CDM64117.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_26_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

33084..34070
DNA (987bp) protein (329aa)
TonB domain protein n=1 Tax=Dialister invisus CAG:218 RepID=R5TCM3_9FIRM
TonB family protein {ECO:0000313|EMBL:CDM65243.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB-like protein
13_1_20cm_3_scaffold_26_29
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(34167..34694)
DNA (528bp) protein (176aa)
Outer membrane protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEF7_CHLTF
Outer membrane protein {ECO:0000313|EMBL:CDM65684.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
outer membrane protein
Displaying items 1-30 of 77 in total

View Taxonomy