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13_1_20cm_3_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5_1
unknown

Not on your lists

comp(268..2580)
DNA (2313bp) protein (771aa)

This feature has no annotations

13_1_20cm_3_scaffold_5_2
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2931..5279)
DNA (2349bp) protein (783aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII51757.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
13_1_20cm_3_scaffold_5_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5276..7135)
DNA (1860bp) protein (620aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical membrane protein id=12556782 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical membrane protein
13_1_20cm_3_scaffold_5_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7400..8284)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B783E7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_3_scaffold_5_5

Not on your lists

comp(8397..9512)
DNA (1116bp) protein (372aa)
von Willebrand factor type A domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF00_CHLTF
VWFA-related Acidobacterial domain {ECO:0000313|EMBL:AIA12800.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
von Willebrand factor type A domain-containing protein
13_1_20cm_3_scaffold_5_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(9451..11184)
DNA (1734bp) protein (578aa)
von Willebrand factor type A domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF00_CHLTF
von Willebrand factor type A domain protein {ECO:0000313|EMBL:AEP12533.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacteriu
von Willebrand factor type A domain-containing protein
13_1_20cm_3_scaffold_5_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11214..12227)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A748_GEMAT rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH38058.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_5_8
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(12253..13476)
DNA (1224bp) protein (408aa)
Pilus retraction protein PilT n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI30_CHLTF
Pilus retraction protein PilT {ECO:0000313|EMBL:AEP11246.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum
pilus retraction protein PilT
13_1_20cm_3_scaffold_5_9
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13555..14307)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZJ36_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:ETC90342.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortor
hypothetical protein
13_1_20cm_3_scaffold_5_10

Not on your lists

14511..14768
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 164 RepID=E3T6Z2_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36086.1}; TaxID=698382 species="Bacteria; environmental samples.;" source="uncultured bacterium 164.;"
hypothetical protein
13_1_20cm_3_scaffold_5_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14846..16147)
DNA (1302bp) protein (434aa)
Serine phosphatase n=1 Tax=uncultured bacterium 164 RepID=E3T6Z4_9BACT rbh
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:CDM66654.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyl
serine phosphatase RsbU
13_1_20cm_3_scaffold_5_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16434..17555)
DNA (1122bp) protein (374aa)
Zinc finger, CHC2-family protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BH50_CHLPD
DNA primase {ECO:0000313|EMBL:CDM66653.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
CHC2-family zinc finger protein
13_1_20cm_3_scaffold_5_13
unknown

Not on your lists

comp(17655..18323)
DNA (669bp) protein (223aa)

This feature has no annotations

13_1_20cm_3_scaffold_5_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18340..18951)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 164 RepID=E3T6Z5_9BACT
Predicted Zn peptidase {ECO:0000313|EMBL:CDM66652.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_5_15
RLO_PLX_64_10, Bacteria

Not on your lists

19104..20939
DNA (1836bp) protein (612aa)
translocation protein TolB n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
WD-40-like beta propeller repeat-containing protein
13_1_20cm_3_scaffold_5_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(20955..21311)
DNA (357bp) protein (119aa)
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein id=14425008 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_20cm_3_scaffold_5_17
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21298..21594)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QQT9_NOSS7
Uncharacterized protein {ECO:0000313|EMBL:AFY47526.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
hypothetical protein
13_1_20cm_3_scaffold_5_18
unknown

Not on your lists

comp(21706..22323)
DNA (618bp) protein (206aa)

This feature has no annotations

13_1_20cm_3_scaffold_5_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22431..22856)
DNA (426bp) protein (142aa)
UPI0003CF08B6 related cluster n=1 Tax=unknown RepID=UPI0003CF08B6
Predicted transcription factor, MBF1 like protein {ECO:0000313|EMBL:CDM66651.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylal
XRE family transcriptional regulator
13_1_20cm_3_scaffold_5_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23059..23244
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66650.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_5_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23267..24508
DNA (1242bp) protein (414aa)
Single-stranded DNA-binding protein DdrA n=1 Tax=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) RepID=DDRA_DEIRA
Uncharacterized protein {ECO:0000313|EMBL:CDM66649.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_5_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

24636..25148
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QM04_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:CDM66648.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_5_23
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

25414..25800
DNA (387bp) protein (129aa)
lactoylglutathione lyase-like lyase (EC:4.4.1.5)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036DC9B1
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_Zixibacteria_50_21_curated
13_1_20cm_3_scaffold_5_24
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26130..26618
DNA (489bp) protein (163aa)
hypothetical protein Tax=GWB2_Deltaproteobacteria_55_19_curated
Putative uncharacterized protein id=1872085 bin=GWB2_Proteobacteria_55_19 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
13_1_20cm_3_scaffold_5_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

26786..27463
DNA (678bp) protein (226aa)
isochorismatase (EC:3.3.2.1)
Isochorismatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GA70_SORC5
Nicotinamidase-like amidase {ECO:0000313|EMBL:CDM66647.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_5_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27643..29373)
DNA (1731bp) protein (577aa)
C-terminal processing peptidase {ECO:0000313|EMBL:CDM66645.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDM66645.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;"
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal peptidase (Prc) n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH65_CHLTF
13_1_20cm_3_scaffold_5_27
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29590..31563)
DNA (1974bp) protein (658aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RHV3_MYCRN rbh
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AEV72103.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;"
multidrug ABC transporter ATPase and permease
13_1_20cm_3_scaffold_5_28
unknown

Not on your lists

comp(31800..32063)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_3_scaffold_5_29
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(32243..32602)
DNA (360bp) protein (120aa)
Anti-sigma factor antagonist n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2W5_9BACT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum
anti-sigma-factor antagonist
13_1_20cm_3_scaffold_5_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

33035..33481
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEP8_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66643.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
Displaying items 1-30 of 96 in total

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