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13_1_20cm_3_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 58 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_58_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2..136
DNA (135bp) protein (45aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CDM65366.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CDM65366.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacte
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPW2_KORVE
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
13_1_20cm_3_scaffold_58_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

133..1266
DNA (1134bp) protein (378aa)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CDM66096.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDM66096.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrin
aminotransferase A (EC:2.6.1.-); K00841 aminotransferase [EC:2.6.1.-] id=24403766 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Paenibacillus polymyxa genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Aspartate aminotransferase
13_1_20cm_3_scaffold_58_3
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

1375..2349
DNA (975bp) protein (325aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQC4_METIM
hypothetical protein Tax=RBG_16_KB1_OP1_55_9_curated
13_1_20cm_3_scaffold_58_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2385..4814)
DNA (2430bp) protein (810aa)
Uncharacterised conserved protein UCP016719 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9U6_9PLAN rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM65440.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_58_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4858..6759)
DNA (1902bp) protein (634aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
Glycoside hydrolase, family 3 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025V9_SOLUE
glycoside hydrolase family protein
13_1_20cm_3_scaffold_58_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6809..8314)
DNA (1506bp) protein (502aa)
SSS sodium solute transporter superfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X72_SOLUE
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ABJ85743.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="
SSS family solute/sodium (Na+) symporter
13_1_20cm_3_scaffold_58_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8737..9645)
DNA (909bp) protein (303aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ0_9BACT rbh
N-acetylmuramic acid 6-phosphate etherase
13_1_20cm_3_scaffold_58_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9743..10735)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67SR6_SYMTH
Predicted N-acetylglucosamine kinase {ECO:0000313|EMBL:CDM65445.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;
hypothetical protein
13_1_20cm_3_scaffold_58_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10845..11807
DNA (963bp) protein (321aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XPG0_PSEMY
Transcriptional regulator {ECO:0000313|EMBL:CDM65446.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
LysR family transcriptional regulator
13_1_20cm_3_scaffold_58_10
unknown

Not on your lists

11850..12155
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_3_scaffold_58_11
unknown

Not on your lists

12195..12668
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_20cm_3_scaffold_58_12
unknown

Not on your lists

12848..13015
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_20cm_3_scaffold_58_13
unknown

Not on your lists

13020..13307
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_3_scaffold_58_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13362..14486)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7A3AB
Selenocysteine lyase {ECO:0000313|EMBL:CDM67064.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative cysteine desulfurase/selenocysteine lyase
13_1_20cm_3_scaffold_58_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14486..15604)
DNA (1119bp) protein (373aa)
6-phosphofructokinase {ECO:0000256|SAAS:SAAS00197180}; EC=2.7.1.11 {ECO:0000256|SAAS:SAAS00197180};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=uncultured bacterium RepID=K1ZMF2_9BACT
13_1_20cm_3_scaffold_58_16
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15871..18612)
DNA (2742bp) protein (914aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037498DF rbh
Family 31 glycosyl hydrolase, alpha-glucosidase {ECO:0000313|EMBL:AGB41378.1}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="H
family 31 glycosyl hydrolase, alpha-glucosidase
13_1_20cm_3_scaffold_58_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18791..19729)
DNA (939bp) protein (313aa)
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CDM64103.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CDM64103.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas
Glucokinase id=4125328 bin=GWC2_Nitrospirae_57_13 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Transcriptional regulator/sugar kinase
13_1_20cm_3_scaffold_58_18
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(19855..20937)
DNA (1083bp) protein (361aa)
Glucoamylase-like glycosyl hydrolase {ECO:0000313|EMBL:AEP13039.1}; EC=3.2.1.3 {ECO:0000313|EMBL:AEP13039.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobac
glucoamylase-like glycosyl hydrolase (EC:3.2.1.3)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035ECFFD
13_1_20cm_3_scaffold_58_19
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20888..21904)
DNA (1017bp) protein (339aa)
Glucoamylase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TM1_STIAD
Glucoamylase {ECO:0000313|EMBL:KGI81041.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
glucodextranase
13_1_20cm_3_scaffold_58_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21981..23198)
DNA (1218bp) protein (406aa)
Xylose ABC transporter membrane protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT92_KORVE rbh
Xylose ABC transporter membrane protein {ECO:0000313|EMBL:CDM64102.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogene
sugar ABC transporter permease
13_1_20cm_3_scaffold_58_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(23315..24865)
DNA (1551bp) protein (517aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomona
Xylose import ATP-binding protein XylG n=3 Tax=Thermoanaerobacter RepID=XYLG_THEP3
ABC transporter-like protein
13_1_20cm_3_scaffold_58_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(25062..26246)
DNA (1185bp) protein (395aa)
ABC-type ribose transport system, periplasmic component n=2 Tax=Anoxybacillus flavithermus RepID=B7GJL0_ANOFW
Xylose-binding protein {ECO:0000313|EMBL:CDM64100.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rbsB; ribose ABC transporter periplasmic protein
13_1_20cm_3_scaffold_58_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

26661..30146
DNA (3486bp) protein (1162aa)
Cna B domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R68_SOLUE rbh
Cna B domain protein {ECO:0000313|EMBL:ABJ87852.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="So
CnaB domain-containing protein
13_1_20cm_3_scaffold_58_24
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30396..31847)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469K6_METBF
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
13_1_20cm_3_scaffold_58_25

Not on your lists

31961..34186
DNA (2226bp) protein (742aa)
Glycoside hydrolase family 3 protein n=1 Tax=uncultured bacterium 253 RepID=E3T742_9BACT rbh
Glycoside hydrolase family 3 protein {ECO:0000313|EMBL:ADC36136.1}; TaxID=698385 species="Bacteria; environmental samples.;" source="uncultured bacterium 253.;"
glycoside hydrolase
13_1_20cm_3_scaffold_58_26

Not on your lists

34190..35857
DNA (1668bp) protein (556aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 253 RepID=E3T740_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36134.1}; TaxID=698385 species="Bacteria; environmental samples.;" source="uncultured bacterium 253.;"
hypothetical protein
13_1_20cm_3_scaffold_58_27
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(35788..37212)
DNA (1425bp) protein (475aa)
Alpha amylase catalytic region n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X723_ACISM
Alpha amylase catalytic region {ECO:0000313|EMBL:ADW71132.1}; Flags: Precursor;; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicel
alpha amylase
13_1_20cm_3_scaffold_58_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(37512..38954)
DNA (1443bp) protein (481aa)
Major Facilitator Superfamily n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJL9_CHLTF
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG93801.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
major facilitator superfamily MFS_1
13_1_20cm_3_scaffold_58_29
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39143..39859)
DNA (717bp) protein (239aa)
Oxidoreductase, short-chain dehydrogenase/reductase family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BEY4_9GAMM
Oxidoreductase, short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EAR09319.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blan
short-chain dehydrogenase
13_1_20cm_3_scaffold_58_30
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(39881..41782)
DNA (1902bp) protein (634aa)
Alpha amylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRJ6_KORVE
alpha amylase Tax=RBG_16_Acidobacteria_70_10_curated
alpha amylase catalytic region
Displaying items 1-30 of 58 in total

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