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13_1_20cm_3_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_72_1
unknown

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_20cm_3_scaffold_72_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(139..978)
DNA (840bp) protein (280aa)
Cyclic nucleotide-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D080_9BACT
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EDY20394.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyclic nucleotide-binding protein
13_1_20cm_3_scaffold_72_3
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(1067..1750)
DNA (684bp) protein (228aa)
antimicrobial peptide ABC transporter ATPase Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
ABC transporter; ATPase component; K02003 putative ABC transport system ATP-binding protein id=17228387 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Synergistetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative ABC transporter ATP-binding protein
13_1_20cm_3_scaffold_72_4
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1796..3679)
DNA (1884bp) protein (628aa)
Adenylate/guanylate cyclase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFE8_ROSCS rbh
guanylate cyclase rbh
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_20cm_3_scaffold_72_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3832..4353)
DNA (522bp) protein (174aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I n=1 Tax=uncultured bacterium 164 RepID=E3T6Z6_9BACT
13_1_20cm_3_scaffold_72_6

Not on your lists

comp(4450..4866)
DNA (417bp) protein (139aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=uncultured bacterium 164 RepID=E3T6Z8_9BACT
13_1_20cm_3_scaffold_72_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4983..5867)
DNA (885bp) protein (295aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=uncultured bacterium 164 RepID=E3T700_9BACT rbh
succinyl-CoA synthetase subunit alpha
13_1_20cm_3_scaffold_72_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5966..7372)
DNA (1407bp) protein (469aa)
Predicted exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:CDM66751.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
hypothetical protein id=14626633 bin=bin7_NC10_sister species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_1_20cm_3_scaffold_72_9
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

7685..8626
DNA (942bp) protein (314aa)
Peptidase M48, Ste24p n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDD6_9BACT
Peptidase M48, Ste24p {ECO:0000313|EMBL:BAL54172.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
peptidase family M48
13_1_20cm_3_scaffold_72_10
unknown

Not on your lists

comp(8721..9254)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_3_scaffold_72_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9342..10505)
DNA (1164bp) protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558, ECO:0000256|SAAS:SAAS00035312};; Succinyl-CoA synthetase subunit beta {EC
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
malate--CoA ligase subunit beta n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003613BED
13_1_20cm_3_scaffold_72_12
RLO_PLX_64_10, Bacteria

Not on your lists

10723..11187
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003769138
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_20cm_3_scaffold_72_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11201..11626
DNA (426bp) protein (142aa)
OsmC family protein n=1 Tax=uncultured bacterium RepID=K2D928_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
OsmC family protein
13_1_20cm_3_scaffold_72_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11922..13958
DNA (2037bp) protein (679aa)
endothelin-converting protein 1 (EC:3.4.24.71); K07386 putative endopeptidase [EC:3.4.24.-] Tax=RBG_16_RIF_WS3X_71_46_curated
Endothelin-converting enzyme 1 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D1_OPITP
pepO; Metallopeptidase PepO, peptidase, M13 family
13_1_20cm_3_scaffold_72_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14206..15105)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INV0_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF41450.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
hypothetical protein
13_1_20cm_3_scaffold_72_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15161..16216)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024P8_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:CDM65803.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_72_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16283..17101)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024P9_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:CDM65804.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_72_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17098..17757)
DNA (660bp) protein (220aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024Q0_SOLUE
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CDM65805.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphat
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_3_scaffold_72_trna_1
unknown

Not on your lists

comp(17928..18001)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_72_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18083..18604)
DNA (522bp) protein (174aa)
MerR family transcriptional regulator n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE0_9BACT
Predicted transcriptional regulator {ECO:0000313|EMBL:CDM66748.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative transcriptional regulator
13_1_20cm_3_scaffold_72_20
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19018..19416
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WFZ5_BURSC
Uncharacterized protein {ECO:0000313|EMBL:KIF82109.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum s
hypothetical protein
13_1_20cm_3_scaffold_72_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19594..20763
DNA (1170bp) protein (390aa)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CDM66702.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDM66702.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrin
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1FAD6_ACIC5 rbh
13_1_20cm_3_scaffold_72_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20801..22048
DNA (1248bp) protein (416aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ06_9BACT
thiamine-monophosphate kinase
13_1_20cm_3_scaffold_72_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22338..23687
DNA (1350bp) protein (450aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGU4_CHLTF
13_1_20cm_3_scaffold_72_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23977..25332
DNA (1356bp) protein (452aa)
4-aminobutyrate aminotransferase apoenzyme {ECO:0000313|EMBL:CDM66738.1}; EC=2.6.1.19 {ECO:0000313|EMBL:CDM66738.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ12_9BACT
13_1_20cm_3_scaffold_72_25
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

25283..25687
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B54EF4
Uncharacterized protein family (UPF0150) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Uncharacterized protein family (UPF0150)
13_1_20cm_3_scaffold_72_26
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25684..26160)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CAZ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIM93065.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terr
13_1_20cm_3_scaffold_72_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(26279..27490)
DNA (1212bp) protein (404aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobact
acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LL67_CHLTF rbh
13_1_20cm_3_scaffold_72_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27605..28945)
DNA (1341bp) protein (447aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA9_CHLTF
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:CDM67052.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylal
cytosine deaminase
13_1_20cm_3_scaffold_72_29
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(29021..30625)
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000381C0A8
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:ABG51943.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmiu
WD-40 repeat-containing protein
Displaying items 1-30 of 46 in total

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