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13_1_20cm_3_scaffold_90

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_90_1
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..97
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q9T6_9DELT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacter
tuf; elongation factor Tu
13_1_20cm_3_scaffold_90_2
unknown

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comp(128..361)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_3_scaffold_90_trna_1
unknown

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445..517
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_90_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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550..966
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036A8B4C
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;
preprotein translocase SecE subunit
13_1_20cm_3_scaffold_90_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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981..1541
DNA (561bp) protein (187aa)
Transcription termination/antitermination protein NusG n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHU3_CHLTF
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas
transcription antitermination protein nusG
13_1_20cm_3_scaffold_90_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1632..2057
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI000371A8A4
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
ribosomal protein L11
13_1_20cm_3_scaffold_90_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2249..2944
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBQ7_9BACT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rplA; 50S ribosomal protein L1
13_1_20cm_3_scaffold_90_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2966..3496
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL10_KORVE
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rplJ; 50S ribosomal protein L10
13_1_20cm_3_scaffold_90_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3798..4181
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DX84_SULAA
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rplL; 50S ribosomal protein L7/L12
13_1_20cm_3_scaffold_90_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4544..8995
DNA (4452bp) protein (1484aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHU8_CHLTF rbh
13_1_20cm_3_scaffold_90_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9104..13306
DNA (4203bp) protein (1401aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleB
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHU9_CHLTF rbh
13_1_20cm_3_scaffold_90_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13488..14909
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F809_SORC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN91588.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
hypothetical protein rbh
13_1_20cm_3_scaffold_90_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14917..15663
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QT92_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFE68966.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_20cm_3_scaffold_90_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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15822..17135
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MM45_9BACT id=89218 bin=ACD5 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:CDM64252.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_3_scaffold_90_14
unknown

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comp(17226..17654)
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_3_scaffold_90_15
unknown

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comp(17736..19097)
DNA (1362bp) protein (454aa)

This feature has no annotations

13_1_20cm_3_scaffold_90_16
unknown

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comp(19538..19678)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 17 items

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