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13_1_20cm_3_scaffold_1068

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1068_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1..318)
DNA (318bp) protein (106aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037B7941
valyl-tRNA synthetase
13_1_20cm_3_scaffold_1068_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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430..1233
DNA (804bp) protein (268aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase id=3937090 bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
13_1_20cm_3_scaffold_1068_3
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1169..1561)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2D6_OWEHD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
13_1_20cm_3_scaffold_1068_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1561..2922)
DNA (1362bp) protein (454aa)
grs1; glycyl-tRNA synthetase (class II); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
glycine-tRNA synthetase subunit beta n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037D1496
grs1; glycyl-tRNA synthetase (class II)
13_1_20cm_3_scaffold_1068_5

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comp(3001..3453)
DNA (453bp) protein (151aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNF9_SINAD
Marine sediment metagenome DNA, contig: S01H1_L05764 {ECO:0000313|EMBL:GAF67559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
redox protein, regulator of disulfide bond formation
13_1_20cm_3_scaffold_1068_trna_1
unknown

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3575..3646
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_1068_6
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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3791..5131
DNA (1341bp) protein (447aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] Tax=GWF2_Lentisphaerae_57_35_curated
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase id=4349096 bin=GWF2_Lentisphaerae_57_35 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
13_1_20cm_3_scaffold_1068_7
unknown

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5428..5712
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_3_scaffold_1068_8
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

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5719..6393
DNA (675bp) protein (225aa)
type 11 methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
Methyltransferase type 11 n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K6M4_9MYCO
type 11 methyltransferase
13_1_20cm_3_scaffold_1068_9
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6518..7111)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DF14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EOZ95595.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
13_1_20cm_3_scaffold_1068_10
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7108..8370)
DNA (1263bp) protein (421aa)
fumarylacetoacetase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002D9F964
Fumarylacetoacetase {ECO:0000313|EMBL:KEQ23009.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
fumarylacetoacetase
13_1_20cm_3_scaffold_1068_11
Jeotgalibacillus sp. D5, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8442..9356)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TH60_BACAO
Uncharacterized protein {ECO:0000313|EMBL:AJD92912.1}; TaxID=1508404 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Jeotgalibacillus.;" source="Jeotgalibacillus sp. D5.;"
hypothetical protein
13_1_20cm_3_scaffold_1068_12
unknown

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comp(9485..10432)
DNA (948bp) protein (316aa)

This feature has no annotations

13_1_20cm_3_scaffold_1068_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10439..11701)
DNA (1263bp) protein (421aa)
Glutamate dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5I8_9BACT rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Glu/Leu/Phe/Val dehydrogenase
13_1_20cm_3_scaffold_1068_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

11897..13012
DNA (1116bp) protein (372aa)
cystathionine gamma-lyase (EC:4.4.1.1) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WF89_9CYAN rbh
cystathionine beta-lyase/cystathionine gamma-synthase
13_1_20cm_3_scaffold_1068_15
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13020..13601)
DNA (582bp) protein (194aa)
Putative membrane protein, putative virulence factor n=1 Tax=Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy) RepID=D5TC71_LEGP2
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=272624 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pn
mviN1; virulence factor
13_1_20cm_3_scaffold_1068_16
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13574..14209)
DNA (636bp) protein (212aa)
Integral membrane protein MviN (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZGE0_9ZZZZ
virulence factor MviN; K03980 virulence factor Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Virulence factor mviN homolog
Displaying 17 items

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