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13_1_20cm_3_scaffold_111

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_111_1
unknown

Not on your lists

2..154
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_20cm_3_scaffold_111_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(215..1339)
DNA (1125bp) protein (375aa)
ABC-2 type transporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI46_9BACT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
ABC transporter, ATP-binding subunit, PltJ-like
13_1_20cm_3_scaffold_111_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1339..2196)
DNA (858bp) protein (286aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI47_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60540.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
ABC transporter, ATP binding protein
13_1_20cm_3_scaffold_111_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2314..3150)
DNA (837bp) protein (279aa)
Secretion protein HlyD family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI48_9BACT
Secretion protein HlyD family protein {ECO:0000313|EMBL:EEF60541.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;
RND family efflux pump membrane fusion protein
13_1_20cm_3_scaffold_111_5
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3258..3890)
DNA (633bp) protein (211aa)
Transcriptional regulator n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CA51_DESTA
Transcriptional regulator {ECO:0000313|EMBL:AFM26442.1}; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" so
transcriptional regulator
13_1_20cm_3_scaffold_111_6
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4035..4448
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SAR7_HAHCH
hypothetical protein Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein
13_1_20cm_3_scaffold_111_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4445..4873
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZK88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95027.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
glyoxalase
13_1_20cm_3_scaffold_111_8
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4870..6210)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R1J6_ISOPI
Uncharacterized protein {ECO:0000313|EMBL:GAN32785.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="
hypothetical protein
13_1_20cm_3_scaffold_111_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6325..7794)
DNA (1470bp) protein (490aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=497964
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C4_9BACT rbh
13_1_20cm_3_scaffold_111_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7791..8081)
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C3_9BACT
13_1_20cm_3_scaffold_111_11
unknown

Not on your lists

comp(8091..8438)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_3_scaffold_111_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8438..9187)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19232.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_111_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9302..10471)
DNA (1170bp) protein (390aa)
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI000376AA9C rbh
SAM-dependent methyltransferase
13_1_20cm_3_scaffold_111_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10567..11463
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D121_9BACT rbh
13_1_20cm_3_scaffold_111_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11640..13181
DNA (1542bp) protein (514aa)
hypothetical protein, partial n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000368CBF1 rbh
Putative choline sulfatase {ECO:0000313|EMBL:EGB92003.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
choline-sulfatase
13_1_20cm_3_scaffold_111_16

Not on your lists

13401..14888
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZSI7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD47318.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rmt3; Rmt3
13_1_20cm_3_scaffold_111_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14894..15604
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000373F97A
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
13_1_20cm_3_scaffold_111_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15750..16748)
DNA (999bp) protein (333aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=497964 species="Bacteria; Ve
Malate dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R8_9BACT rbh
malate dehydrogenase
13_1_20cm_3_scaffold_111_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16799..17254
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWN9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21831.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Fe-S metabolism associated SufE
13_1_20cm_3_scaffold_111_20
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

17440..20781
DNA (3342bp) protein (1114aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000364385F
carbamoyl-phosphate synthase large subunit
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
13_1_20cm_3_scaffold_111_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20950..21552
DNA (603bp) protein (201aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales;
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK10_9BACT
cyclophilin type peptidyl-prolyl cis-trans isomerase
13_1_20cm_3_scaffold_111_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21666..22553
DNA (888bp) protein (296aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D238_9BACT
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:EDY19278.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacte
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_20cm_3_scaffold_111_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

22708..23994
DNA (1287bp) protein (429aa)
sodium:dicarboxylate symporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
sodium:dicarboxylate symporter id=7716553 bin=BACIGN_2 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP
sodium:dicarboxylate symporter
13_1_20cm_3_scaffold_111_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

24147..26417
DNA (2271bp) protein (757aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF80_THET1 rbh
peptidase S8/S53 subtilisin kexin sedolisin Tax=RBG_16_RIF_CHLX_72_14_curated
peptidase S8/S53 subtilisin kexin sedolisin
13_1_20cm_3_scaffold_111_25
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26561..26974
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SSN3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK91977.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_20cm_3_scaffold_111_26
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(26993..27454)
DNA (462bp) protein (154aa)
Phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:CCW35280.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCW35280.1};; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chtho
phosphohistidine phosphatase, SixA (EC:3.1.3.-)
Phosphohistidine phosphatase, SixA n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EY85_9BACT
13_1_20cm_3_scaffold_111_27
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27558..28136)
DNA (579bp) protein (193aa)
ROK family protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GF52_NITSI
ROK family protein {ECO:0000313|EMBL:AEJ02276.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (str
ROK family protein
13_1_20cm_3_scaffold_111_28
Methylacidiphilum fumariolicum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(28244..30571)
DNA (2328bp) protein (776aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000378C1E3
ppk; polyphosphate kinase
13_1_20cm_3_scaffold_111_29
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(30629..31315)
DNA (687bp) protein (229aa)
phosphate uptake regulator, PhoU n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E5D
phosphate uptake regulator PhoU; K02039 phosphate transport system protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PhoU family transcriptional regulator
13_1_20cm_3_scaffold_111_30
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(31402..32235)
DNA (834bp) protein (278aa)
pstB; ABC phosphate uptake transporter, ATP-binding protein (EC:3.6.3.27) Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
High-affinity phosphate transport protein (ABC superfamily, atp_bind) n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXT6_9BACT
pstB; phosphate ABC transporter ATPase
Displaying items 1-30 of 33 in total

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