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13_1_20cm_3_scaffold_1238

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1238_1
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..764)
DNA (762bp) protein (254aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" sourc
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit subfamily, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLP8_9BACT
13_1_20cm_3_scaffold_1238_2
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

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comp(883..1755)
DNA (873bp) protein (291aa)
Nucleotidyltransferase/DNA polymerase n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXS2_9BACT
Nucleotidyltransferase/DNA polymerase {ECO:0000313|EMBL:ACO70895.1}; TaxID=156588 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
DNA repair nucleotidyltransferase/DNA polymerase-like protein
13_1_20cm_3_scaffold_1238_3
unknown

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1945..2271
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_20cm_3_scaffold_1238_4
unknown

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2299..2757
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_20cm_3_scaffold_1238_5
unknown

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comp(3554..3997)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_3_scaffold_1238_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4108..5247
DNA (1140bp) protein (380aa)
Permease YjgP/YjgQ family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU57_9BACT
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:EDY22095.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
permease, YjgP/YjgQ family
13_1_20cm_3_scaffold_1238_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5244..5753
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU58_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22096.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_1238_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5811..6794
DNA (984bp) protein (328aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Ch
transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B2E
nifR3 family TIM-barrel protein
13_1_20cm_3_scaffold_1238_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6804..7175
DNA (372bp) protein (124aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYL1_9BACT
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:EDY20552.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.
sufA; Fe-S cluster assembly scaffold protein
13_1_20cm_3_scaffold_1238_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7336..7896)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCQ4_9BACT
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
ribosome recycling factor
13_1_20cm_3_scaffold_1238_11
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(7909..8649)
DNA (741bp) protein (247aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCQ3_9BACT
13_1_20cm_3_scaffold_1238_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8746..9702)
DNA (957bp) protein (319aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=497964 species="B
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYD2_9BACT
13_1_20cm_3_scaffold_1238_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9708..9890)
DNA (183bp) protein (61aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein id=14431411 bin=bin3_NC10 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_20cm_3_scaffold_1238_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(9937..10536)
DNA (600bp) protein (200aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYD1_9BACT
adenylate kinase
13_1_20cm_3_scaffold_1238_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(10848..11198)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037C5ED7
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
50S ribosomal protein L21
13_1_20cm_3_scaffold_1238_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11281..12720)
DNA (1440bp) protein (480aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=497964 species="Bacte
Glycogen synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6N7_9BACT
glgA; glycogen synthase
13_1_20cm_3_scaffold_1238_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12752..13195)
DNA (444bp) protein (148aa)
tRNA adenylyltransferase {ECO:0000313|EMBL:EDY20183.1}; EC=2.7.7.72 {ECO:0000313|EMBL:EDY20183.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniob
tRNA adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL9_9BACT
metal dependent phosphohydrolase
Displaying 17 items

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