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13_1_20cm_3_scaffold_611

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_611_1
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

905..1558
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) RepID=D1B587_SULD5
Lipoprotein {ECO:0000313|EMBL:ETW14310.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
hypothetical protein
13_1_20cm_3_scaffold_611_2

Not on your lists

2007..3023
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174438A
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48600.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_611_3
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3641..4921)
DNA (1281bp) protein (427aa)
cfA; cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
cyclopropane fatty acyl phospholipid synthase (EC:2.1.1.79)
Cyclopropane fatty acyl phospholipid synthase n=1 Tax=Serratia liquefaciens ATCC 27592 RepID=S5EGA8_SERLI rbh
13_1_20cm_3_scaffold_611_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5174..5482
DNA (309bp) protein (103aa)
RNP-1 like RNA-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK70_9BACT
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:EEF59708.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sourc
RNP-1 like RNA-binding protein
13_1_20cm_3_scaffold_611_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5596..5772
DNA (177bp) protein (59aa)
translation initiation factor IF-1 n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036D538A
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.
translation initiation factor IF-1
13_1_20cm_3_scaffold_611_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

6041..6940
DNA (900bp) protein (300aa)
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:ACB76146.1}; EC=1.14.19.1 {ECO:0000313|EMBL:ACB76146.1};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" so
stearoyl-CoA 9-desaturase (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZX94_OPITP
13_1_20cm_3_scaffold_611_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7515..8759)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4V0G1_XANC8 rbh
Strain LMCP11 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28744.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;"
hypothetical protein
13_1_20cm_3_scaffold_611_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8784..9266)
DNA (483bp) protein (161aa)
NIPSNAP family containing protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0U3_ACISM
NIPSNAP family containing protein {ECO:0000313|EMBL:ADW70127.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (s
NIPSNAP family containing protein
13_1_20cm_3_scaffold_611_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9350..9913
DNA (564bp) protein (188aa)
Transcriptional regulator, TetR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKM5_KORVE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABF42575.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
TetR family transcriptional regulator
13_1_20cm_3_scaffold_611_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10115..11185)
DNA (1071bp) protein (357aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BC18_9RHIZ
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AGK57680.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" so
mandelate racemase/muconate lactonizing protein
13_1_20cm_3_scaffold_611_11
unknown

Not on your lists

11247..11621
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_3_scaffold_611_12
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11771..12409)
DNA (639bp) protein (213aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=GWA2_Rhodocyclales_65_20_curated
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1T8_9BACT
13_1_20cm_3_scaffold_611_13
unknown

Not on your lists

comp(12490..13227)
DNA (738bp) protein (246aa)

This feature has no annotations

13_1_20cm_3_scaffold_611_14
unknown

Not on your lists

13390..13779
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_3_scaffold_611_15
Halobacillus sp. BBL2006, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13776..14381
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD92_9BACT
Oxidoreductase {ECO:0000313|EMBL:KHE68287.1}; TaxID=1543706 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus sp. BBL2006.;"
hypothetical protein
13_1_20cm_3_scaffold_611_16
Streptomyces sp. W007, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14396..14743
DNA (348bp) protein (116aa)
Putative integral membrane protein n=1 Tax=Streptomyces sp. W007 RepID=H0BP89_9ACTO
Putative integral membrane protein {ECO:0000313|EMBL:EHM24484.1}; TaxID=1055352 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. W007.;"
integral membrane protein
13_1_20cm_3_scaffold_611_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

14966..15436
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037BD9EE
nitroreductase Tax=RBG_16_RIF_WS3X_71_46_curated
nitroreductase
13_1_20cm_3_scaffold_611_18
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

15458..16438
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B2C8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIQ01420.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
13_1_20cm_3_scaffold_611_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16481..16948)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMV2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58877.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
hypothetical protein
13_1_20cm_3_scaffold_611_20
unknown

Not on your lists

comp(17035..17376)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_3_scaffold_611_21
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17414..17863)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UHT8_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:AFY94016.1}; Flags: Precursor;; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon min
hypothetical protein
13_1_20cm_3_scaffold_611_22
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17900..18334)
DNA (435bp) protein (145aa)
glyoxalase n=1 Tax=Rhizobium gallicum RepID=UPI0003760835
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein {ECO:0000313|EMBL:CEJ72052.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriace
glyoxalase/bleomycin resistance protein/dioxygenase protein
13_1_20cm_3_scaffold_611_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18344..19120)
DNA (777bp) protein (259aa)
NADH dehydrogenase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MEP9_CORCM
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG89416.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KB
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
13_1_20cm_3_scaffold_611_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19113..19667)
DNA (555bp) protein (185aa)
NADH dehydrogenase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MEP9_CORCM
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG89416.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KB
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
13_1_20cm_3_scaffold_611_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(19733..19978)
DNA (246bp) protein (82aa)
Sec-independent protein translocase protein TatA n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Y8_9BACT
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ell
Sec-independent protein translocase tatA/E-like protein
13_1_20cm_3_scaffold_611_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20203..20808
DNA (606bp) protein (202aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D563_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RNA polymerase sigma factor
13_1_20cm_3_scaffold_611_27
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

20809..21639
DNA (831bp) protein (277aa)
Putative transmembrane anti-sigma factor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG29_9CHLR
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EFH88731.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kt
anti-sigma factor
13_1_20cm_3_scaffold_611_28
unknown

Not on your lists

21744..21899
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_3_scaffold_611_29
unknown

Not on your lists

21906..22352
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_3_scaffold_611_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22369..22827
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY22247.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying items 1-30 of 32 in total

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