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13_1_20cm_3_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 107 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_100_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RBG_16_Actinobacteria_68_12_curated
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0EBE8_9ACTN
13_1_20cm_3_scaffold_100_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(266..1420)
DNA (1155bp) protein (385aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Actinobacteria_68_12_curated
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZF0_CONWI
13_1_20cm_3_scaffold_100_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1543..2769)
DNA (1227bp) protein (409aa)
zinc-dependent protease, membrane associated (); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_Actinobacteria_68_12_curated
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0C0T6_9BACL
membrane-associated Zn-dependent protease 1
13_1_20cm_3_scaffold_100_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2766..3827)
DNA (1062bp) protein (354aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_16_Actinobacteria_68_12_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Selenomonas sp. CM52 RepID=J5VBW8_9FIRM
13_1_20cm_3_scaffold_100_5
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3852..4328
DNA (477bp) protein (159aa)
adenylattransferase (EC:2.3.1.1) Tax=RBG_16_Actinobacteria_68_21_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000377C787
hypothetical protein
13_1_20cm_3_scaffold_100_6
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

4332..5708
DNA (1377bp) protein (459aa)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U6R8_DEIML
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:ADV66757.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" sou
membrane bound O-acyl transferase MBOAT family protein
13_1_20cm_3_scaffold_100_7
unknown

Not on your lists

6093..7199
DNA (1107bp) protein (369aa)

This feature has no annotations

13_1_20cm_3_scaffold_100_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7169..7966)
DNA (798bp) protein (266aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RBG_16_Actinobacteria_68_12_curated
Phosphatidate cytidylyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F070_CONWI
phosphatidate cytidylyltransferase
13_1_20cm_3_scaffold_100_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7963..8703)
DNA (741bp) protein (247aa)
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RBG_16_Actinobacteria_68_12_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW64_RUBXD
13_1_20cm_3_scaffold_100_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8700..9254)
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor; K02838 ribosome recycling factor Tax=RBG_16_Actinobacteria_68_12_curated
ribosome recycling factor
13_1_20cm_3_scaffold_100_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9254..10027)
DNA (774bp) protein (258aa)
uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_Actinobacteria_68_12_curated
uridylate kinase (EC:2.7.4.22)
uridylate kinase n=1 Tax=Patulibacter americanus RepID=UPI0003B4720C
13_1_20cm_3_scaffold_100_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10024..10830)
DNA (807bp) protein (269aa)
Elongation factor Ts n=1 Tax=uncultured gamma proteobacterium RepID=H5SMG1_9GAMM
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RBG_16_Actinobacteria_68_12_curated
tsf; protein chain elongation factor EF-Ts
13_1_20cm_3_scaffold_100_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(10823..11650)
DNA (828bp) protein (276aa)
30S ribosomal protein S2 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LU70_TEPAE
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Actinobacteria_68_12_curated
30S ribosomal protein S2
13_1_20cm_3_scaffold_100_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11761..12651)
DNA (891bp) protein (297aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RBG_16_Actinobacteria_68_12_curated
pseudouridine synthase n=1 Tax=Patulibacter americanus RepID=UPI0003B6EE4D
pseudouridine synthase
13_1_20cm_3_scaffold_100_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12632..13195)
DNA (564bp) protein (188aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=RBG_16_Actinobacteria_68_12_curated
Lipoprotein signal peptidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F077_CONWI
lipoprotein signal peptidase
13_1_20cm_3_scaffold_100_16
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13210..13578)
DNA (369bp) protein (123aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWL7_HALOH
DNA-binding protein Tax=RBG_16_Actinobacteria_64_13_curated
TraR/DksA family transcriptional regulator
13_1_20cm_3_scaffold_100_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13575..13871)
DNA (297bp) protein (99aa)
UPF0235 protein WQQ_16460 n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZHY2_9GAMM
hypothetical protein; K09131 hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_100_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13957..14388)
DNA (432bp) protein (144aa)
DivIVA protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UJS4_9FIRM
DivIVA domain; K04074 cell division initiation protein Tax=RBG_16_Actinobacteria_68_12_curated
DivIVA domain-containing protein
13_1_20cm_3_scaffold_100_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14405..14701)
DNA (297bp) protein (99aa)
cell division protein ZapA n=1 Tax=Patulibacter americanus RepID=UPI0003B69585
hypothetical protein; K02221 YggT family protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_100_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14756..15283)
DNA (528bp) protein (176aa)
Cell division protein SepF n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F080_CONWI
hypothetical protein; K09772 cell division inhibitor SepF Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_100_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15297..15830)
DNA (534bp) protein (178aa)
Alanine racemase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F081_CONWI
alanine racemase; K06997 Tax=RBG_16_Actinobacteria_68_12_curated
alanine racemase
13_1_20cm_3_scaffold_100_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15880..16587)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F082_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51942.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_100_23
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(16584..17903)
DNA (1320bp) protein (440aa)
tRNA adenylyltransferase/tRNA cytidylyltransferase (EC:2.7.7.25 2.7.7.21)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MPI4_9BACT
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_20cm_3_scaffold_100_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17910..18293)
DNA (384bp) protein (128aa)
dfrA Tax=GWC2_Rokubacteria_70_16_curated
Endoribonuclease L-PSP id=4599718 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
endoribonuclease L-PSP
13_1_20cm_3_scaffold_100_25
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18290..18820)
DNA (531bp) protein (177aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|SAAS:SAAS00218099, ECO:0000313|EMBL:AJQ28255.1}; EC=4.2.1.19 {ECO:0000256|SAAS:SAAS00263879, ECO:0000313|EMBL:AJQ28255.1};; TaxID=1192197 species="
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Pelosinus fermentans JBW45 RepID=I9DF82_9FIRM
13_1_20cm_3_scaffold_100_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18832..20142)
DNA (1311bp) protein (437aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F092_CONWI
UDP-N-acetylglucosamine1-carboxyvinyltransferase
13_1_20cm_3_scaffold_100_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

20163..20714
DNA (552bp) protein (184aa)
Putative domain HDIG-containing protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PRW9_9FIRM
metal dependent phosphohydrolase Tax=RBG_16_Actinobacteria_68_12_curated
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_100_28
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20711..21115
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YPL6_9ACTO
Glyoxalase {ECO:0000313|EMBL:KKD03102.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
quinone binding protein
13_1_20cm_3_scaffold_100_29
unknown

Not on your lists

21125..21358
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_3_scaffold_100_30
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

21449..22177
DNA (729bp) protein (243aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
Putative uncharacterized protein id=4649496 bin=GWC2_Chloroflexi_73_18 species=Arthrobacter globiformis genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Displaying items 1-30 of 107 in total

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