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13_1_20cm_3_scaffold_1017

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1017_1
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1494)
DNA (1494bp) protein (498aa)
BNR/Asp-box repeat protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5I1_ACIC5
Uncharacterized protein {ECO:0000313|EMBL:KJS61882.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
hypothetical protein
13_1_20cm_3_scaffold_1017_2
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1674..2780
DNA (1107bp) protein (369aa)
Major facilitator superfamily MFS_1 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTF6_HALO1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACY13851.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; H
major facilitator superfamily protein
13_1_20cm_3_scaffold_1017_3
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2898..4490)
DNA (1593bp) protein (531aa)
GTP-binding protein HSR1-related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCD8_CELFN
ABC transporter {ECO:0000313|EMBL:KGN33064.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
GTP-binding protein HSR1-like protein
13_1_20cm_3_scaffold_1017_4
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4487..6163)
DNA (1677bp) protein (559aa)
Putative ABC transporter n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGK7_GEOOG
ABC transporter {ECO:0000313|EMBL:KGH48522.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
putative ABC transporter
13_1_20cm_3_scaffold_1017_5
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6533..7222)
DNA (690bp) protein (230aa)
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RBG_16_RIF_CHLX_70_13_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIB6_THET1
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_1017_6
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7358..8104
DNA (747bp) protein (249aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S6U2_INTC7
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:ADU46828.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" sour
coenzyme F420-dependent NADP oxidoreductase
13_1_20cm_3_scaffold_1017_7
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8113..8871
DNA (759bp) protein (253aa)
Dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS7_9GAMM
Dioxygenase {ECO:0000313|EMBL:AJE03978.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
dioxygenase
13_1_20cm_3_scaffold_1017_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(8878..9816)
DNA (939bp) protein (313aa)
proline racemase; K01777 proline racemase [EC:5.1.1.4] Tax=RBG_16_Chloroflexi_63_12_curated
proline racemase; K01777 proline racemase [EC:5.1.1.4] id=24449599 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
proline racemase
13_1_20cm_3_scaffold_1017_9
unknown

Not on your lists

comp(9962..10372)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_3_scaffold_1017_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10749..11729)
DNA (981bp) protein (327aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ornithine cyclodeaminase (EC:4.3.1.12)
ornithine cyclodeaminase n=1 Tax=Streptomyces purpureus RepID=UPI0003671A35
13_1_20cm_3_scaffold_1017_11
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11765..12400)
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KGA06556.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
Hypothetical membrane protein id=1801697 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
13_1_20cm_3_scaffold_1017_12
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

12480..12716
DNA (237bp) protein (79aa)
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
Putative uncharacterized protein id=3877658 bin=GWC2_Chloroflexi_73_18 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_20cm_3_scaffold_1017_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13171..13521)
DNA (351bp) protein (117aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WN62_GEOS8
response regulator in two-component regulatory system (CheY-like protein) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
integral membrane sensor hybrid histidine kinase
13_1_20cm_3_scaffold_1017_14
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13558..14553)
DNA (996bp) protein (332aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LSE4_HALO1
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACY15643.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" sou
PAS/PAC sensor hybrid histidine kinase
13_1_20cm_3_scaffold_1017_15
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14813..15655
DNA (843bp) protein (281aa)
Phosphate binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM0_9CLOT
Phosphate binding protein {ECO:0000313|EMBL:EEG31138.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentos
phosphate binding protein
13_1_20cm_3_scaffold_1017_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15704..17998
DNA (2295bp) protein (765aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
UPI0003D06F0D related cluster n=1 Tax=unknown RepID=UPI0003D06F0D
13_1_20cm_3_scaffold_1017_17
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

17998..19545
DNA (1548bp) protein (516aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZC64_9BACT
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCQ90883.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrosp
response regulator receiver protein
13_1_20cm_3_scaffold_1017_18
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

19551..20948
DNA (1398bp) protein (466aa)
Putative inner membrane protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZKE3_9GAMM
hypothetical protein Tax=CG_Arma_02
hypothetical protein
13_1_20cm_3_scaffold_1017_19
unknown

Not on your lists

20962..21738
DNA (777bp) protein (259aa)

This feature has no annotations

13_1_20cm_3_scaffold_1017_20
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21735..23045
DNA (1311bp) protein (437aa)
Putative PAS/PAC sensor protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYT0_DESFR
response regulator receiver protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
13_1_20cm_3_scaffold_1017_21
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

23045..23749
DNA (705bp) protein (235aa)
two component LuxR family transcriptional regulator Tax=CSP1_4_Chloroflexi
two component LuxR family transcriptional regulator id=14629943 bin=bin8_Chloro species=Streptomyces bingchenggensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Two-component system, response regulator
13_1_20cm_3_scaffold_1017_22
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23810..24181
DNA (372bp) protein (124aa)
Two component transcriptional regulator, winged helix family protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NH80_9FIRM
Two component transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:EGO64563.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Aceton
OmpR; response regulator
13_1_20cm_3_scaffold_1017_23

Not on your lists

24192..24719
DNA (528bp) protein (176aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD29174.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dat:HRM2_33390 two-component transcriptional regulatory protein; K07814 putative two-component system response regulator id=127346 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
13_1_20cm_3_scaffold_1017_24
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

24733..25119
DNA (387bp) protein (129aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A0P3_DESOH
HD-hydrolase domain-containing protein Tax=RBG_16_Chloroflexi_68_14_curated
response regulator receiver modulated metal dependent phosphohydrolase
13_1_20cm_3_scaffold_1017_25
unknown

Not on your lists

comp(25061..25528)
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_20cm_3_scaffold_1017_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

25570..26232
DNA (663bp) protein (221aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL95_KORVE
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABF42355.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
phage SPO1 DNA polymerase-related protein
13_1_20cm_3_scaffold_1017_27
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26411..26836
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EJZ2_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:GAD85449.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
hypothetical protein
13_1_20cm_3_scaffold_1017_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

26837..27790
DNA (954bp) protein (318aa)
protease do (EC:3.4.21.-); K01362 [EC:3.4.21.-] id=24401580 bin=RBG_19FT_COMBO_GAL15_69_19 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
protease do (EC:3.4.21.-)
peptidase S1 and S6, chymotrypsin/Hap Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_3_scaffold_1017_29
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

27815..28255
DNA (441bp) protein (147aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JS64_9THEM
Acetyltransferase, GNAT family Tax=RBG_16_Chloroflexi_54_18_curated
acetyltransferase
13_1_20cm_3_scaffold_1017_30
unknown

Not on your lists

28204..28554
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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