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13_1_20cm_3_scaffold_102

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_102_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1..609)
DNA (609bp) protein (203aa)
Squalene/phytoene synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D169_9BACT
Squalene/phytoene synthase {ECO:0000313|EMBL:EDY20081.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
erg9; Phytoene/squalene synthetase fused to flavin containing amine oxidoreductase
13_1_20cm_3_scaffold_102_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(570..1781)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D167_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20079.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_102_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1856..2947)
DNA (1092bp) protein (364aa)
lepB; Signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Signal peptidase I n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXV1_9BACT
lepB; Signal peptidase I
13_1_20cm_3_scaffold_102_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3047..4843)
DNA (1797bp) protein (599aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZN7_9BACT
GTP-binding protein LepA
13_1_20cm_3_scaffold_102_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5302..6018
DNA (717bp) protein (239aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I4_9BACT
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EDY19846.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.
hydrolase
13_1_20cm_3_scaffold_102_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6043..6387
DNA (345bp) protein (115aa)
Anti-sigma factor antagonist n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8T7_9BACT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
anti-sigma-factor antagonist
13_1_20cm_3_scaffold_102_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6423..7544)
DNA (1122bp) protein (374aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R4_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY17122.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucuronic acid transferase WabG
13_1_20cm_3_scaffold_102_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7565..8854
DNA (1290bp) protein (430aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW8_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY21288.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
group 1 glycosyl transferase
13_1_20cm_3_scaffold_102_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8871..9950
DNA (1080bp) protein (360aa)
Glycosyl transferase family 9 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R5_9BACT
Glycosyl transferase family 9 {ECO:0000313|EMBL:EDY17123.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glycosyl transferase family 9
13_1_20cm_3_scaffold_102_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9947..11824
DNA (1878bp) protein (626aa)
msbA; lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R6_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY17124.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin
13_1_20cm_3_scaffold_102_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11858..12586
DNA (729bp) protein (243aa)
PHP domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I8_9BACT
PHP domain protein {ECO:0000313|EMBL:EDY19850.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Metal-dependent phosphoesterase (PHP family)
13_1_20cm_3_scaffold_102_12
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

12607..12894
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000305BF67
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
hypothetical protein
13_1_20cm_3_scaffold_102_13
unknown

Not on your lists

comp(12787..13017)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_3_scaffold_102_14

Not on your lists

13148..14017
DNA (870bp) protein (290aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
13_1_20cm_3_scaffold_102_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14077..15480)
DNA (1404bp) protein (468aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia su
Pyruvate kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHI9_9BACT
pyruvate kinase
13_1_20cm_3_scaffold_102_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15638..16312)
DNA (675bp) protein (225aa)
Outer membrane protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISS8_KORVE
Outer membrane protein {ECO:0000313|EMBL:ABF40072.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
outer membrane protein
13_1_20cm_3_scaffold_102_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16260..17675)
DNA (1416bp) protein (472aa)
Tetratricopeptide domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I8_9BACT
Tetratricopeptide domain protein {ECO:0000313|EMBL:EDY18818.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_102_18
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

17830..18141
DNA (312bp) protein (104aa)
pflA1; pyruvate formate lyase activating enzyme (EC:1.97.1.4); K04070 putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RBG_16_Chloroflexi_68_14_curated
13_1_20cm_3_scaffold_102_19
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17989..19527)
DNA (1539bp) protein (513aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BGS8_9RHIZ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AGK59350.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicr
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_3_scaffold_102_20
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19712..20518)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QYP6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX61798.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_20cm_3_scaffold_102_21
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20852..21913
DNA (1062bp) protein (354aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:ACO32611.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ACO32611.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Aci
aroF2; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F361_ACIC5
13_1_20cm_3_scaffold_102_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21894..22469
DNA (576bp) protein (192aa)
anthranilate synthase, component II (EC:4.1.3.27)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVB1_9BACT
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:EDY21353.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
13_1_20cm_3_scaffold_102_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22466..23962
DNA (1497bp) protein (499aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EDY21354.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EDY21354.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="
Anthranilate synthase component I n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVB2_9BACT
trpE; anthranilate synthase, catalytic subunit
13_1_20cm_3_scaffold_102_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23959..24624
DNA (666bp) protein (222aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=454194 spe
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=TRPD_MOOTA
13_1_20cm_3_scaffold_102_25
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24611..24991
DNA (381bp) protein (127aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=314254 spe
anthranilate phosphoribosyltransferase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B4C4AD
trpD; anthranilate phosphoribosyltransferase
13_1_20cm_3_scaffold_102_26
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24988..26541
DNA (1554bp) protein (518aa)
TrpC {ECO:0000313|EMBL:ACN14872.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ACN14872.1};; EC=5.3.1.24 {ECO:0000313|EMBL:ACN14872.1};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfo
trpC; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC:4.1.3.27 5.3.1.24)
TrpC n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QB73_DESAH
13_1_20cm_3_scaffold_102_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

26545..27777
DNA (1233bp) protein (411aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobac
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) id=14430224 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
tryptophan synthase subunit beta (EC:4.2.1.20)
13_1_20cm_3_scaffold_102_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

27774..28577
DNA (804bp) protein (268aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=454194 species="B
Tryptophan synthase alpha chain n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=TRPA_GEOBB
trpA; tryptophan synthase subunit alpha
Displaying 28 items

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