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13_1_20cm_3_scaffold_1047

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1047_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..1009)
DNA (1008bp) protein (336aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_1047_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1174..3354
DNA (2181bp) protein (727aa)
3-methyladenine DNA glycosylase; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037FDA2B
helix-turn-helix domain-containing protein
13_1_20cm_3_scaffold_1047_3
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3351..3854
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369E343
putative phosphatase, C-terminal domain of histone macro H2A1 like protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Appr-1-p processing domain-containing protein
13_1_20cm_3_scaffold_1047_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3981..4802
DNA (822bp) protein (274aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RBG_16_Actinobacteria_67_10_curated
Pyrroline-5-carboxylate reductase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VWX3_9ACTO
pyrroline-5-carboxylate reductase
13_1_20cm_3_scaffold_1047_5
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4799..5482
DNA (684bp) protein (228aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase domain protein n=1 Tax=mine drainage metagenome RepID=T0Z1T4_9ZZZZ
6-phosphogluconolactonase {ECO:0000313|EMBL:KHL11272.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
13_1_20cm_3_scaffold_1047_6
unknown

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5519..6034
DNA (516bp) protein (172aa)
Hypothetical protein
13_1_20cm_3_scaffold_1047_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6035..6580)
DNA (546bp) protein (182aa)
MJ0042 family finger-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4L9_CONWI
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1047_8

Not on your lists

6784..7269
DNA (486bp) protein (162aa)
Putative RNA methylase family UPF0020 n=1 Tax=uncultured marine microorganism HF4000_008B14 RepID=B3T126_9ZZZZ
Marine sediment metagenome DNA, contig: S06H3_C02023 {ECO:0000313|EMBL:GAI02081.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
HemK family modification methylase
13_1_20cm_3_scaffold_1047_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7280..8467
DNA (1188bp) protein (396aa)
3-oxoacyl-CoA thiolase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RBG_16_Actinobacteria_67_10_curated
acetyl-CoA acetyltransferase n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003777789
acetyl-CoA acetyltransferase
13_1_20cm_3_scaffold_1047_10
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8451..10361
DNA (1911bp) protein (637aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q4N3_STANL
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADD42063.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebran
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_3_scaffold_1047_11
unknown

Not on your lists

10361..10948
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_20cm_3_scaffold_1047_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11313..13427
DNA (2115bp) protein (705aa)
Helicase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F301_CONWI
helicase Tax=RBG_16_Actinobacteria_67_10_curated
helicase
13_1_20cm_3_scaffold_1047_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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13444..15042
DNA (1599bp) protein (533aa)
Cytochrome C biogenesis protein transmembrane region n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RPN2_LEIAQ rbh
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Tax=RBG_16_Actinobacteria_68_12_curated
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
13_1_20cm_3_scaffold_1047_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15064..15720
DNA (657bp) protein (219aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V2_CONWI
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB54133.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Con
two component transcriptional regulator rbh
13_1_20cm_3_scaffold_1047_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15717..17075
DNA (1359bp) protein (453aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1W0_CONWI
integral membrane sensor signal transduction histidine kinase
13_1_20cm_3_scaffold_1047_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17072..18202
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1W1_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB54142.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
hypothetical protein
13_1_20cm_3_scaffold_1047_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18199..19140
DNA (942bp) protein (314aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1W2_CONWI
ABC transporter related protein {ECO:0000313|EMBL:ADB54143.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexiba
ABC transporter
13_1_20cm_3_scaffold_1047_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19137..19952
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1W3_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB54144.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_1047_19

Not on your lists

comp(19949..20278)
DNA (330bp) protein (110aa)
carboxylate-amine ligase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037FC87F
Uncharacterized protein {ECO:0000313|EMBL:KKK71553.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_3_scaffold_1047_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20755..21699)
DNA (945bp) protein (315aa)
ctaA; Heme A synthase (EC:1.3.-.-)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000369DF6C
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_3_scaffold_1047_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21701..22918)
DNA (1218bp) protein (406aa)
Phosphoglycerate mutase {ECO:0000313|EMBL:AEA28391.1}; EC=5.4.2.1 {ECO:0000313|EMBL:AEA28391.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
phosphoglycerate mutase (EC:5.4.2.1)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000371400B
13_1_20cm_3_scaffold_1047_22
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22928..23362)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026286DE
Putative uridine kinase {ECO:0000313|EMBL:AHH21446.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
putative uridine kinase
13_1_20cm_3_scaffold_1047_23
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23362..23868)
DNA (507bp) protein (169aa)
nicotinamide mononucleotide adenylyltransferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B43CD2
Putative uncharacterized protein {ECO:0000313|EMBL:EFL30519.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromoge
cytidyltransferase-like domain protein
13_1_20cm_3_scaffold_1047_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(23885..24910)
DNA (1026bp) protein (342aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Actinobacteria_67_10_curated
Selenide, water dikinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C208_SPHTD
selenide, water dikinase
13_1_20cm_3_scaffold_1047_25
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

24938..25681
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Patulibacter medicamentivorans RepID=H0EAV2_9ACTN
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Actinobacteria_67_10_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_3_scaffold_1047_26
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25678..26301)
DNA (624bp) protein (208aa)
ABC-1 domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZY7_OPITP
ABC-1 domain protein {ECO:0000313|EMBL:ACB77323.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).
hypothetical protein
Displaying 26 items

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