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13_1_20cm_3_scaffold_1107

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1107_1
unknown

Not on your lists

301..594
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_3_scaffold_1107_2
unknown

Not on your lists

comp(605..889)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_3_scaffold_1107_3
unknown

Not on your lists

comp(922..1143)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_3_scaffold_1107_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1282..2988)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037B5574
intracellular alkaline serine proteinase Tax=RBG_16_Actinobacteria_68_12_curated
intracellular alkaline serine proteinase
13_1_20cm_3_scaffold_1107_5
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3139..4821)
DNA (1683bp) protein (561aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TYH5_9CYAN
Carboxypeptidase A2 {ECO:0000313|EMBL:KIF18485.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
peptidase M14 carboxypeptidase A
13_1_20cm_3_scaffold_1107_6
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(4823..6337)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF16_THET1
Uncharacterized protein {ECO:0000313|EMBL:ACZ41522.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
hypothetical protein
13_1_20cm_3_scaffold_1107_7
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6348..6677)
DNA (330bp) protein (110aa)
Probable two-component response regulator protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DQD6_9RHOB
Chemotaxis protein CheY {ECO:0000313|EMBL:KEJ88547.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter d
kdpE; two-component system, OmpR family, KDP operon response regulator
13_1_20cm_3_scaffold_1107_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6894..7922)
DNA (1029bp) protein (343aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_16_Actinobacteria_68_12_curated
Glutamate--tRNA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E0Z7_9ACTN
glutamyl-tRNA synthetase
13_1_20cm_3_scaffold_1107_9
unknown

Not on your lists

comp(8071..8823)
DNA (753bp) protein (251aa)

This feature has no annotations

13_1_20cm_3_scaffold_1107_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9062..10192
DNA (1131bp) protein (377aa)
Permease, MFS-type n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K576_SACES
Permease, MFS-type Tax=RBG_16_Actinobacteria_68_12_curated
Permease, MFS-type
13_1_20cm_3_scaffold_1107_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10164..10583)
DNA (420bp) protein (140aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_1107_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10655..11296
DNA (642bp) protein (214aa)
CaCA family calcium/proton antiporter; K07300 Ca2+:H+ antiporter Tax=RBG_16_Actinobacteria_68_12_curated
Calcium/proton exchanger id=4074803 bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cax-1; calcium/proton exchanger
13_1_20cm_3_scaffold_1107_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11293..11625
DNA (333bp) protein (111aa)
Calcium/proton antiporter, CaCA family n=3 Tax=Paenibacillus mucilaginosus RepID=F8F8Z0_PAEMK
CaCA family calcium/proton antiporter; K07300 Ca2+:H+ antiporter Tax=RBG_16_Actinobacteria_68_12_curated
CaCA family calcium/proton antiporter
13_1_20cm_3_scaffold_1107_14
unknown

Not on your lists

11700..11903
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_3_scaffold_1107_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11900..12388
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036EC621
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
ABC-type antimicrobial peptide transport system ATPase component
13_1_20cm_3_scaffold_1107_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13053..13565)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI000361EEE4
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_1107_17
unknown

Not on your lists

comp(13614..13898)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_3_scaffold_1107_18
unknown

Not on your lists

comp(13995..14201)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_3_scaffold_1107_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14294..14866
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037EAF42
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1107_20
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14835..15833)
DNA (999bp) protein (333aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7B9_SPHTD
Threonine aldolase {ECO:0000313|EMBL:ETW92988.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
13_1_20cm_3_scaffold_1107_21
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

15957..16475
DNA (519bp) protein (173aa)
Type II secretion system protein E n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CYV0_9BACT
Type II secretion system protein E {ECO:0000313|EMBL:EFQ23728.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivoran
MSHA biogenesis protein MshE
13_1_20cm_3_scaffold_1107_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16463..17869)
DNA (1407bp) protein (469aa)
alpha amylase catalytic subunit; K01187 alpha-glucosidase [EC:3.2.1.20] Tax=RBG_16_Actinobacteria_68_12_curated
Alpha amylase catalytic region n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZU6_ACIFD
alpha amylase catalytic subunit
13_1_20cm_3_scaffold_1107_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17904..18938
DNA (1035bp) protein (345aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1J9_CONWI
radical SAM enzyme, Cfr family
13_1_20cm_3_scaffold_1107_24
unknown

Not on your lists

comp(18951..19136)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_3_scaffold_1107_25
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19186..19767)
DNA (582bp) protein (194aa)
Acetyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYA2_BEUC1
Acetyltransferase {ECO:0000313|EMBL:EWT01551.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
acetyltransferase
13_1_20cm_3_scaffold_1107_26
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20295..20621
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI000289C178
Uncharacterized protein {ECO:0000313|EMBL:EZP40436.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
putative uncharacterized protein
13_1_20cm_3_scaffold_1107_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

20662..21735
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037EAF3A rbh
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1107_28
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22263..22691)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1YNY7_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KGN33835.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
13_1_20cm_3_scaffold_1107_29
Streptomyces resistomycificus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22727..23122)
DNA (396bp) protein (132aa)
RemN protein n=1 Tax=Streptomyces resistomycificus RepID=Q70DW1_9ACTO
RemN protein {ECO:0000313|EMBL:CAE51185.1}; TaxID=67356 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces resistomycificus.;"
EmrB/QacA subfamily drug resistance transporter
Displaying 29 items

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