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13_1_20cm_3_scaffold_1111

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1111_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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86..1756
DNA (1671bp) protein (557aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ADB49276.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ADB49276.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales;
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAK7_CONWI
13_1_20cm_3_scaffold_1111_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1753..2202)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6XRZ4_9ACTO
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_1111_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2228..2530
DNA (303bp) protein (101aa)
Cobalamin B12-binding domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F959_CONWI
Methylmalonyl-CoA mutase C-terminal domain {ECO:0000313|EMBL:AHY47343.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter
methylmalonyl-CoA mutase C-terminal domain
13_1_20cm_3_scaffold_1111_4
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2527..3291
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YKC6_9BACT
Crotonase {ECO:0000313|EMBL:KJS02917.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
Enoyl-CoA hydratase/isomerase
13_1_20cm_3_scaffold_1111_5
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3288..3962
DNA (675bp) protein (225aa)
Putative hemagglutinin-related protein, Type V secretion pathway n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M4X9_9XANT
Hemagglutinin-related protein {ECO:0000313|EMBL:EFF42445.1}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
putative hemagglutinin-related protein, Type V secretion pathway
13_1_20cm_3_scaffold_1111_6
RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated, Uhrbacteria, Parcubacteria, Bacteria

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comp(3964..4794)
DNA (831bp) protein (277aa)
putative metalloendopeptidase (EC:3.4.24.-) Tax=RIFOXYC2_FULL_OD1_Uhrbacteria_47_19_curated
putative metalloendopeptidase (EC:3.4.24.-)
FG-GAP repeat protein n=1 Tax=uncultured bacterium RepID=K2BXE9_9BACT
13_1_20cm_3_scaffold_1111_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4921..5679
DNA (759bp) protein (253aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F958_CONWI
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ADB53053.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;
electron transfer flavoprotein alpha/beta-subunit
13_1_20cm_3_scaffold_1111_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5676..6635
DNA (960bp) protein (320aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F957_CONWI
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ADB53052.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sou
electron transfer flavoprotein subunit alpha
13_1_20cm_3_scaffold_1111_9
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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6632..8308
DNA (1677bp) protein (559aa)
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=14424616 bin=bin1_lowGC species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP rbh
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1)
13_1_20cm_3_scaffold_1111_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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8358..8930
DNA (573bp) protein (191aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE1_SPHTD
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ACZ40784.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacte
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_20cm_3_scaffold_1111_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8945..9250
DNA (306bp) protein (102aa)
pyridoxal-5'-phosphate-dependent enzyme subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Putative amino-acid dehydratase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5U3_9DELT
dehydratase
13_1_20cm_3_scaffold_1111_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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9247..9465
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M176_ACIFD
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RBG_16_Actinobacteria_67_10_curated
50S ribosomal protein L31
13_1_20cm_3_scaffold_1111_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9652..10563
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E4G1_9ACTN
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_1111_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10692..11153
DNA (462bp) protein (154aa)
OsmC-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZQ7_RUBXD
OsmC-like protein; K04063 osmotically inducible protein OsmC Tax=RBG_16_Actinobacteria_67_10_curated
OsmC-like protein
13_1_20cm_3_scaffold_1111_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11143..11577
DNA (435bp) protein (145aa)
peroxiredoxin n=1 Tax=Streptomyces RepID=UPI000362D5FB
Peroxiredoxin {ECO:0000313|EMBL:ETK32482.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
OsmC-like protein
13_1_20cm_3_scaffold_1111_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11590..12633
DNA (1044bp) protein (348aa)
Peptide chain release factor 1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F953_CONWI
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RBG_16_Actinobacteria_68_12_curated
peptide chain release factor 1
13_1_20cm_3_scaffold_1111_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12630..13421
DNA (792bp) protein (264aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Release factor glutamine methyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F952_CONWI
protein-(glutamine-N5) methyltransferase
13_1_20cm_3_scaffold_1111_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13418..14011
DNA (594bp) protein (198aa)
SUA5/yciO/yrdC domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F951_CONWI
SUA5/yciO/yrdC domain-containing protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RBG_16_Actinobacteria_68_12_curated
SUA5/yciO/yrdC domain-containing protein
13_1_20cm_3_scaffold_1111_19
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

14011..15900
DNA (1890bp) protein (630aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
serine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase n=1 Tax=Patulibacter americanus RepID=UPI0003B59252
13_1_20cm_3_scaffold_1111_20
unknown

Not on your lists

15869..16045
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_3_scaffold_1111_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16368..17042
DNA (675bp) protein (225aa)
glycosyl transferase, family 4, conserved region; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] Tax=RBG_16_Actinobacteria_68_12_curated
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E4G6_9ACTN
glycosyl transferase, family 4, conserved region
13_1_20cm_3_scaffold_1111_22
unknown

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17097..17291
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_3_scaffold_1111_23
unknown

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17291..17686
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_20cm_3_scaffold_1111_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17683..18534
DNA (852bp) protein (284aa)
ATP synthase subunit a n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F942_CONWI
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
ATP synthase F0 subunit alpha
13_1_20cm_3_scaffold_1111_25
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18548..18808
DNA (261bp) protein (87aa)
ATP synthase C chain n=1 Tax=Patulibacter medicamentivorans RepID=H0E4H3_9ACTN
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter m
ATP synthase F0 C subunit
13_1_20cm_3_scaffold_1111_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18805..19341
DNA (537bp) protein (179aa)
ATP synthase subunit b n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F940_CONWI
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
ATP synthase F0 subunit B
13_1_20cm_3_scaffold_1111_27
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19410..19871
DNA (462bp) protein (154aa)
F0F1 ATP synthase subunit delta n=1 Tax=Halomonas smyrnensis RepID=UPI00031BE208
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
hypothetical protein
13_1_20cm_3_scaffold_1111_28
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19924..20961
DNA (1038bp) protein (346aa)
atpA; ATP synthase F1 subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RBG_16_Actinobacteria_64_13_curated
atpA; ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=ATPA_CARHZ
Displaying 28 items

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