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13_1_20cm_3_scaffold_113

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_113_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..1413
DNA (1413bp) protein (471aa)
Putative peptide ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E3_GEMAT
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90220.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC-type transporter, periplasmic subunit
13_1_20cm_3_scaffold_113_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1865..2320
DNA (456bp) protein (152aa)
Peptide ABC transporter, permease protein n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KBZ9_CHLTE
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90219.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC-type transporter, integral membrane subunit
13_1_20cm_3_scaffold_113_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2615..3106
DNA (492bp) protein (164aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QWH8_CHLT3
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90218.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC-type transporter, integral membrane subunit
13_1_20cm_3_scaffold_113_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3108..4136
DNA (1029bp) protein (343aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AHG90217.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oligopeptide/dipeptide ABC transporter, ATPase subunit
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein id=14629695 bin=bin8_Chloro species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
13_1_20cm_3_scaffold_113_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4133..5056
DNA (924bp) protein (308aa)
Putative peptide ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D9_GEMAT
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AHG90216.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oligopeptide/dipeptide ABC transporter, ATPase subunit
13_1_20cm_3_scaffold_113_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5893..6726
DNA (834bp) protein (278aa)
Major facilitator superfamily transporter n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V4W6_HALED
Amino acid/peptide transporter {ECO:0000313|EMBL:AHG90215.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amino acid/peptide transporter
13_1_20cm_3_scaffold_113_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6726..7469
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88701.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF541
13_1_20cm_3_scaffold_113_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7577..8398)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D7_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90214.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_113_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8395..9207)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D7_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90214.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_113_10
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9417..9980
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0003018E9C
Glutamine amidotransferase {ECO:0000313|EMBL:KEZ56923.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
Predicted glutamine amidotransferases
13_1_20cm_3_scaffold_113_11
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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9980..11041
DNA (1062bp) protein (354aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EPG73205.1}; EC=2.4.-.- {ECO:0000313|EMBL:EPG73205.1};; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Lept
Glycosyltransferase, group 1 family protein n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3V9U5_9LEPT
glycosyltransferase
13_1_20cm_3_scaffold_113_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11113..11862
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D5_GEMAT
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHG90211.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
glycosyl transferase family 2
13_1_20cm_3_scaffold_113_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11859..12632
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7N9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH38249.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_113_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12947..13678
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000374AC69
Uncharacterized protein {ECO:0000313|EMBL:AHG90209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_113_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13805..14038)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90207.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_113_16
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14106..15170
DNA (1065bp) protein (355aa)
Glycine oxidase ThiO n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAZ7_MYXSD
Glycine oxidase ThiO {ECO:0000313|EMBL:KFE69554.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalang
glycine oxidase ThiO
13_1_20cm_3_scaffold_113_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15222..16130
DNA (909bp) protein (303aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D3_GEMAT
13_1_20cm_3_scaffold_113_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16127..17209
DNA (1083bp) protein (361aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonad
Pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D2_GEMAT
pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit
13_1_20cm_3_scaffold_113_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17209..18189
DNA (981bp) protein (327aa)
Pyruvate dehydrogenase E1 component beta subunit {ECO:0000313|EMBL:BAH37791.1}; EC=1.2.4.1 {ECO:0000313|EMBL:BAH37791.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimo
pdhB; pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D1_GEMAT
13_1_20cm_3_scaffold_113_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18196..19632
DNA (1437bp) protein (479aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source=
Pyruvate dehydrogenase E2 component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D0_GEMAT
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
13_1_20cm_3_scaffold_113_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19870..21276
DNA (1407bp) protein (469aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.
Dihydrolipoyl dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C7_GEMAT
dihydrolipoamide dehydrogenase
13_1_20cm_3_scaffold_113_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21292..21984
DNA (693bp) protein (231aa)
lipB; lipoyltransferase (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
lipB; lipoate biosynthesis protein B; Lipoate-protein ligase B (EC:2.3.1.-) id=14430292 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lipB; lipoyltransferase (EC:2.3.1.181)
13_1_20cm_3_scaffold_113_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21981..24062
DNA (2082bp) protein (694aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6C2_GEMAT
Helicase superfamily 1 UvrD-related protein
13_1_20cm_3_scaffold_113_24
unknown

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24130..24576
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_3_scaffold_113_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(24662..26116)
DNA (1455bp) protein (485aa)
Membrane or secreted protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T5_GRAFK
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG89360.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RagB/SusD domain-containing protein
13_1_20cm_3_scaffold_113_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26146..27207)
DNA (1062bp) protein (354aa)
TonB-dependent outer membrane receptor n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T4_GRAFK
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89359.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent outer membrane protein, SusC/RagA
Displaying 26 items

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