ggKbase home page

13_1_20cm_3_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_115_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

35..661
DNA (627bp) protein (209aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT
NAD(P)H-quinone oxidoreductase subunit K
13_1_20cm_3_scaffold_115_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

658..1353
DNA (696bp) protein (232aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH-quinone oxidoreductase subunit C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
NAD(P)H-quinone oxidoreductase subunit J
13_1_20cm_3_scaffold_115_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1354..2661
DNA (1308bp) protein (436aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH-quinone oxidoreductase subunit D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT rbh
NAD(P)H-quinone oxidoreductase subunit H
13_1_20cm_3_scaffold_115_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2658..3212
DNA (555bp) protein (185aa)
NADH-quinone oxidoreductase chain E n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z0_GEMAT
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:AHG90828.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH-quinone oxidoreductase, E subunit
13_1_20cm_3_scaffold_115_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3212..4525
DNA (1314bp) protein (438aa)
NADH-quinone oxidoreductase chain F {ECO:0000313|EMBL:BAH38699.1}; EC=1.6.99.5 {ECO:0000313|EMBL:BAH38699.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Ge
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT
13_1_20cm_3_scaffold_115_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4526..6112
DNA (1587bp) protein (529aa)
Putative NADH-quinone oxidoreductase chain G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y8_GEMAT
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein {ECO:0000313|EMBL:AHG90826.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
13_1_20cm_3_scaffold_115_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6109..7389
DNA (1281bp) protein (427aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH-quinone oxidoreductase subunit H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y7_GEMAT
NAD(P)H-quinone oxidoreductase subunit 1
13_1_20cm_3_scaffold_115_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7389..7889
DNA (501bp) protein (167aa)
nuoI; NADH-quinone oxidoreductase chain I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y6_GEMAT
NAD(P)H-quinone oxidoreductase subunit I
13_1_20cm_3_scaffold_115_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7889..8440
DNA (552bp) protein (184aa)
nuoJ; NADH-quinone oxidoreductase chain J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain J n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y5_GEMAT
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
13_1_20cm_3_scaffold_115_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8430..8723
DNA (294bp) protein (98aa)
nuoK; NADH-quinone oxidoreductase chain K (EC:1.6.99.5); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH:ubiquinone oxidoreductase subunit K n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6B929
NAD(P)H-quinone oxidoreductase subunit 4L
13_1_20cm_3_scaffold_115_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8723..10942
DNA (2220bp) protein (740aa)
nuoL; NADH-quinone oxidoreductase chain L (EC:1.6.99.5) Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y3_GEMAT
proton-translocating NADH-quinone oxidoreductase, chain L
13_1_20cm_3_scaffold_115_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10952..12535
DNA (1584bp) protein (528aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
proton-translocating NADH-quinone oxidoreductase, chain M
NADH dehydrogenase I subunit M id=1250619 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_20cm_3_scaffold_115_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12535..14067
DNA (1533bp) protein (511aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH-quinone oxidoreductase subunit N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=NUON_GEMAT
NAD(P)H-quinone oxidoreductase subunit 2
13_1_20cm_3_scaffold_115_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14074..15441
DNA (1368bp) protein (456aa)
Phosphomannomutase {ECO:0000313|EMBL:BAH38690.1}; EC=5.4.2.8 {ECO:0000313|EMBL:BAH38690.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" sour
manB; phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y0_GEMAT
13_1_20cm_3_scaffold_115_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15446..17188
DNA (1743bp) protein (581aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X9_GEMAT
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38689.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
hypothetical membrane protein
13_1_20cm_3_scaffold_115_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17185..18129
DNA (945bp) protein (315aa)
carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carbamate kinase (EC:2.7.2.2)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000380661D
13_1_20cm_3_scaffold_115_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18184..18894
DNA (711bp) protein (237aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SUCC_GEMAT
13_1_20cm_3_scaffold_115_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18912..19274
DNA (363bp) protein (121aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SUCC_GEMAT
Succinyl-CoA ligase [ADP-forming] subunit beta
13_1_20cm_3_scaffold_115_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19443..20069
DNA (627bp) protein (209aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmat
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X7_GEMAT
13_1_20cm_3_scaffold_115_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20083..20502
DNA (420bp) protein (140aa)
Nucleoside diphosphate kinase {ECO:0000313|EMBL:BAH38685.1}; EC=2.7.4.6 {ECO:0000313|EMBL:BAH38685.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimo
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X5_GEMAT
13_1_20cm_3_scaffold_115_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20580..21092
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90812.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF177
13_1_20cm_3_scaffold_115_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


21122..21304
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL32_GEMAT
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
50S ribosomal protein L32
13_1_20cm_3_scaffold_115_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21306..22346
DNA (1041bp) protein (347aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X2_GEMAT rbh
Phosphate acyltransferase
13_1_20cm_3_scaffold_115_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22343..23335
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X1_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 3
13_1_20cm_3_scaffold_115_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23348..23608
DNA (261bp) protein (87aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadete
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CAG0_METED
malonyl CoA-acyl carrier protein transacylase
13_1_20cm_3_scaffold_115_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23626..24207
DNA (582bp) protein (194aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmati
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X0_GEMAT
13_1_20cm_3_scaffold_115_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24207..24944
DNA (738bp) protein (246aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:BAH38679.1}; EC=1.1.1.100 {ECO:0000313|EMBL:BAH38679.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonada
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W9_GEMAT
13_1_20cm_3_scaffold_115_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25039..25278
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACP_GEMAT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmati
Acyl carrier protein
13_1_20cm_3_scaffold_115_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25278..26522
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W7_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
13_1_20cm_3_scaffold_115_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26527..27708
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W6_GEMAT
Putative menaquinone biosynthesis protein {ECO:0000313|EMBL:AHG90804.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative menaquinone biosynthesis protein
Displaying items 1-30 of 33 in total

View Taxonomy