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13_1_20cm_3_scaffold_1207

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1207_1
unknown

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1..93
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_20cm_3_scaffold_1207_2
unknown

Not on your lists

comp(1197..1469)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_3_scaffold_1207_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1534..2253
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0P2_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB53976.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_1207_4
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2622..4316
DNA (1695bp) protein (565aa)
Ig domain protein group 1 domain protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9Q6U4_9NOSO
Ig domain-containing protein group 1 domain-containing protein {ECO:0000313|EMBL:KJH73162.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococca
Ig domain-containing protein group 1 domain-containing protein
13_1_20cm_3_scaffold_1207_5
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4313..5881
DNA (1569bp) protein (523aa)
PKD domain containing protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H229_CELFA
PKD domain containing protein {ECO:0000313|EMBL:ADG73799.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain AT
PKD domain-containing protein
13_1_20cm_3_scaffold_1207_6
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5945..6292
DNA (348bp) protein (116aa)
YCII-related protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LRT1_9ACTO
YCII-related protein {ECO:0000313|EMBL:AGL17930.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
YCII-related protein
13_1_20cm_3_scaffold_1207_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6289..6657
DNA (369bp) protein (123aa)
YCII-related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWJ8_9CHLR
DGPF domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
DGPF domain-containing protein
13_1_20cm_3_scaffold_1207_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6696..7847
DNA (1152bp) protein (384aa)
rpoE; RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14629878 bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
rpoE; RNA polymerase ECF-subfamily sigma factor
13_1_20cm_3_scaffold_1207_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7858..9108
DNA (1251bp) protein (417aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_16_Actinobacteria_68_12_curated
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QHG8_CATAD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_3_scaffold_1207_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9101..9727
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI0003483E7C
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AGZ46699.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DS
GCN5-like N-acetyltransferase
13_1_20cm_3_scaffold_1207_11
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9764..11230
DNA (1467bp) protein (489aa)
Metal dependent phosphohydrolase n=1 Tax=Paenibacillus sp. P22 RepID=T2LT51_9BACL
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDN43602.1}; TaxID=483908 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_1207_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11184..13514)
DNA (2331bp) protein (777aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035DC9F9 rbh
DNA ligase D
13_1_20cm_3_scaffold_1207_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13785..14717)
DNA (933bp) protein (311aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U646_OCEP5
13_1_20cm_3_scaffold_1207_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14707..15234)
DNA (528bp) protein (176aa)
accD; acetyl-CoA carboxylase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=ACCD_PELTS
acetyl-CoA carboxylase subunit beta
13_1_20cm_3_scaffold_1207_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15514..16290)
DNA (777bp) protein (259aa)
arginase; K01476 arginase [EC:3.5.3.1] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI000349841F
arginase
13_1_20cm_3_scaffold_1207_16
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(16287..17204)
DNA (918bp) protein (306aa)
GCN5-related N-acetyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2H7_SPHTD
N-acetyltransferase GCN5
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_20cm_3_scaffold_1207_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17185..17814)
DNA (630bp) protein (210aa)
HAD family hydrolase n=1 Tax=Williamsia sp. D3 RepID=V8CZX2_9ACTO
HAD family hydrolase Tax=RBG_16_Actinobacteria_68_12_curated
HAD family hydrolase
13_1_20cm_3_scaffold_1207_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17824..19077)
DNA (1254bp) protein (418aa)
3-oxoacyl-ACP synthase (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_16_Actinobacteria_68_12_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Paenibacillus lactis 154 RepID=G4HLU4_9BACL
3-oxoacyl-ACP synthase
13_1_20cm_3_scaffold_1207_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19077..19700)
DNA (624bp) protein (208aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Actinobacteria_68_12_curated
3-oxoacyl-ACP synthase n=1 Tax=Salisaeta longa RepID=UPI0003B74B9B
3-oxoacyl-ACP reductase
13_1_20cm_3_scaffold_1207_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19801..20466)
DNA (666bp) protein (222aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RBG_16_Actinobacteria_68_12_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH81_RHOM4
malonyl CoA-acyl carrier protein transacylase
13_1_20cm_3_scaffold_1207_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20415..20705)
DNA (291bp) protein (97aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RBG_16_Actinobacteria_68_12_curated
Putative uncharacterized protein n=1 Tax=Chlorella variabilis RepID=E1Z713_CHLVA
FabD; (acyl-carrier-protein) S-malonyltransferase
13_1_20cm_3_scaffold_1207_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20672..21343)
DNA (672bp) protein (224aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RBG_16_Actinobacteria_68_12_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Paenibacillus sanguinis RepID=UPI0003693C5B
13_1_20cm_3_scaffold_1207_23
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21567..21986)
DNA (420bp) protein (140aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=2 Tax=Bacillus cereus RepID=J8NPJ4_BACCE
fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
13_1_20cm_3_scaffold_1207_24
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(21983..22591)
DNA (609bp) protein (203aa)
RNA polymerase sigma factor, sigma-70 family Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
RNA polymerase sigma factor, sigma-70 family id=24480312 bin=RBG_19FT_COMBO_GAL15_69_19 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
RNA polymerase ECF-type sigma factor
13_1_20cm_3_scaffold_1207_25
Geobacillus sp. WSUCF1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22614..23207
DNA (594bp) protein (198aa)
birA; biotin [acetyl-CoA carboxylase] synthetase; transcriptional repressor of the biotin operon (EC:6.3.4.15)
Biotin [acetyl-CoA carboxylase] synthetase transcriptional repressor of the biotin operon n=2 Tax=Geobacillus RepID=Q5KXX1_GEOKA
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
13_1_20cm_3_scaffold_1207_26
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23182..25128)
DNA (1947bp) protein (649aa)
N-acetylmuramoyl-L-alanine amidase, family 2 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRY1_ACIC1
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:ABK52191.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="
N-acetylmuramoyl-L-alanine amidase
13_1_20cm_3_scaffold_1207_27
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

25310..26548
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4X1_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:ACZ39288.1}; Flags: Precursor;; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sph
hypothetical protein
13_1_20cm_3_scaffold_1207_28
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

26558..27325
DNA (768bp) protein (256aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2N5_DESTA
membrane protease subunit, stomatin/prohibitin Tax=RBG_16_Actinobacteria_64_13_curated
membrane protease subunit, stomatin/prohibitin
13_1_20cm_3_scaffold_1207_29
RBG_16_OP11_Curtissbacteria_39_7_curated, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

27475..28122
DNA (648bp) protein (216aa)
Galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=RBG_16_OP11_Curtissbacteria_39_7_curated
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
galactose-1-phosphate uridylyltransferase, putative; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=72672 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
13_1_20cm_3_scaffold_1207_30
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(28119..28433)
DNA (315bp) protein (105aa)
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying items 1-30 of 31 in total

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