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13_1_20cm_3_scaffold_127

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_127_1
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

Not on your lists

comp(1..342)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745641
Putative uncharacterized protein {ECO:0000313|EMBL:EGD83632.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-0
hypothetical protein
13_1_20cm_3_scaffold_127_2
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

581..1003
DNA (423bp) protein (141aa)
Lactoylglutathione lyase family protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FRF9_9DELT
Lactoylglutathione lyase family protein {ECO:0000313|EMBL:EKO41137.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" s
hypothetical protein
13_1_20cm_3_scaffold_127_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

960..1457
DNA (498bp) protein (166aa)
Hydrolase, putative, cyclic phosphodiesterase-like domain-containing n=2 Tax=Geobacter metallireducens RepID=Q39RG0_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:ETX05148.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hydrolase, putative, cyclic phosphodiesterase-like domain-containing
13_1_20cm_3_scaffold_127_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1495..2214)
DNA (720bp) protein (240aa)
Metallophosphoesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA19_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:EDY16646.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoesterase, ICC
13_1_20cm_3_scaffold_127_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2313..3143
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA20_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16647.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_127_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3226..5106)
DNA (1881bp) protein (627aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7V0_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY17473.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_127_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5144..6508)
DNA (1365bp) protein (455aa)
permease n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E20
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
hypothetical protein
13_1_20cm_3_scaffold_127_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6605..8407)
DNA (1803bp) protein (601aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9S8_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY16859.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
TPR domain-containing protein
13_1_20cm_3_scaffold_127_9
unknown

Not on your lists

8488..8913
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_20cm_3_scaffold_127_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8879..10594)
DNA (1716bp) protein (572aa)
Putative aminopeptidase n=2 Tax=Singulisphaera acidiphila RepID=L0DC24_SINAD
Putative aminopeptidase {ECO:0000313|EMBL:AGA26226.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
aminopeptidase
13_1_20cm_3_scaffold_127_11
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10632..12875)
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035F8234
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43709.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
conserved hypothetical protein
13_1_20cm_3_scaffold_127_12
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

12917..13489
DNA (573bp) protein (191aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVN7_OPITP
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
multiple antibiotic resistance (MarC)-like protein
13_1_20cm_3_scaffold_127_13
unknown

Not on your lists

comp(13581..13991)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_3_scaffold_127_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14077..15516
DNA (1440bp) protein (480aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCP0_9BACT
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EDY15788.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavu
hopanoid biosynthesis associated radical SAM protein HpnH
13_1_20cm_3_scaffold_127_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15526..17562
DNA (2037bp) protein (679aa)
Squalene-hopene cyclase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCK3_9BACT
Squalene-hopene cyclase {ECO:0000313|EMBL:EDY15838.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sqhC; Squalene-hopene cyclase
13_1_20cm_3_scaffold_127_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17682..18281
DNA (600bp) protein (200aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrob
Superoxide dismutase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMA4_9BACT
sodA; Superoxide dismutase
13_1_20cm_3_scaffold_127_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18464..19699
DNA (1236bp) protein (412aa)
Aminotransferase class I and II n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY42_9BACT
Aminotransferase class I and II {ECO:0000313|EMBL:EDY21190.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
L,L-diaminopimelate aminotransferase
13_1_20cm_3_scaffold_127_18
unknown

Not on your lists

19858..20289
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_20cm_3_scaffold_127_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20286..21059
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3X8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18958.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_127_trna_1
unknown

Not on your lists

comp(21065..21136)
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_127_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21356..22882
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D782_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17733.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_127_21
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

22913..23953
DNA (1041bp) protein (347aa)
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
13_1_20cm_3_scaffold_127_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(23970..25754)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB80_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16268.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
alpha/beta hydrolase
13_1_20cm_3_scaffold_127_23
unknown

Not on your lists

25902..26216
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_3_scaffold_127_24
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(26290..29325)
DNA (3036bp) protein (1012aa)
aldehyde dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Aldehyde Dehydrogenase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUG1_OPITP rbh
aldehyde dehydrogenase
13_1_20cm_3_scaffold_127_25
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29583..30620
DNA (1038bp) protein (346aa)
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacterac
threonine aldolase (EC:4.1.2.5)
L-threonine aldolase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF55_GEOUR
13_1_20cm_3_scaffold_127_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

30664..31119
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW54_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21646.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_20cm_3_scaffold_127_27
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

31240..33321
DNA (2082bp) protein (694aa)
Thiol:disulfide interchange protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKQ4_CHLTF
cytochrome c biogenesis protein transmembrane region Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Thiol:disulfide interchange protein
13_1_20cm_3_scaffold_127_28
Saccharopolyspora spinosa, Saccharopolyspora, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

33377..33607
DNA (231bp) protein (77aa)
polyketide cyclase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379793
Displaying 29 items

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