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13_1_20cm_3_scaffold_1285

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1285_1
unknown

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3..140
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_3_scaffold_1285_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(82..870)
DNA (789bp) protein (263aa)
Metal dependent phosphohydrolase n=1 Tax=Paenibacillus lactis 154 RepID=G4HH12_9BACL
Metal-dependent phosphohydrolase HD region {ECO:0000313|EMBL:AHG90156.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
metal-dependent phosphohydrolase HD region
13_1_20cm_3_scaffold_1285_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

910..1980
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AHG90154.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S-adenosylmethionine-dependent methyltransferase
13_1_20cm_3_scaffold_1285_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2273..3058)
DNA (786bp) protein (262aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054
Formamidopyrimidine-DNA glycosylase/AP lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A643_GEMAT
formamidopyrimidine-DNA glycosylase
13_1_20cm_3_scaffold_1285_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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3167..3823
DNA (657bp) protein (219aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ0_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:CDH45116.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.
LuxR family DNA-binding response regulator
13_1_20cm_3_scaffold_1285_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3927..4700
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90152.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1285_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5151..6308
DNA (1158bp) protein (386aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=2507309 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
13_1_20cm_3_scaffold_1285_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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6256..7104
DNA (849bp) protein (283aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=14625227 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_3_scaffold_1285_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7497..8522
DNA (1026bp) protein (342aa)
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:AHG90149.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Alcohol dehydrogenase GroES domain protein
13_1_20cm_3_scaffold_1285_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8546..10348
DNA (1803bp) protein (601aa)
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
Aminotransferase class I and II {ECO:0000313|EMBL:AHG90146.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
aminotransferase class I and II
13_1_20cm_3_scaffold_1285_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10439..10963)
DNA (525bp) protein (175aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=861299 sp
Putative 3-methyladenine DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A637_GEMAT
3-methyladenine DNA glycosylase
13_1_20cm_3_scaffold_1285_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10950..12710)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A636_GEMAT rbh
NYN domain, limkain-b1-type {ECO:0000313|EMBL:AHG90142.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NYN domain, limkain-b1-type
13_1_20cm_3_scaffold_1285_13
unknown

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13019..13144
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_20cm_3_scaffold_1285_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13251..14291
DNA (1041bp) protein (347aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" s
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A634_GEMAT
putative two-component histidine kinase
13_1_20cm_3_scaffold_1285_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14295..14594
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A633_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG90137.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_1285_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14595..16013
DNA (1419bp) protein (473aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A631_GEMAT
Putative NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37691.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemm
putative NtrC family two-component response regulator
13_1_20cm_3_scaffold_1285_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16051..17451
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A630_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37690.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_1285_18

Not on your lists

17459..17941
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A629_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AIA18982.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Protein of unknown function DUF4390
13_1_20cm_3_scaffold_1285_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18048..18542)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A628_GEMAT
HNH endonuclease {ECO:0000313|EMBL:AHG90131.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
HNH endonuclease
13_1_20cm_3_scaffold_1285_20
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(18808..19806)
DNA (999bp) protein (333aa)
ilvE; branched-chain-amino-acid transaminase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6W9_METSW
13_1_20cm_3_scaffold_1285_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19864..21204)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A627_GEMAT rbh
Amidohydrolase {ECO:0000313|EMBL:AHG90130.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amidohydrolase
13_1_20cm_3_scaffold_1285_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21204..23651)
DNA (2448bp) protein (816aa)
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:AHG90128.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
penicillin-binding protein, 1A family
13_1_20cm_3_scaffold_1285_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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23791..25005
DNA (1215bp) protein (405aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A625_GEMAT
Tyrosyl-tRNA synthetase
13_1_20cm_3_scaffold_1285_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25166..25642
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH40671.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_1285_25
unknown

Not on your lists

25703..26407
DNA (705bp) protein (235aa)

This feature has no annotations

13_1_20cm_3_scaffold_1285_26
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26502..27269)
DNA (768bp) protein (256aa)
Small-conductance mechanosensitive ion channel-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4T5_RAMTT
Small-conductance mechanosensitive ion channel-like protein {ECO:0000313|EMBL:AEG92591.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibac
small-conductance mechanosensitive ion channel
13_1_20cm_3_scaffold_1285_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27298..27975)
DNA (678bp) protein (226aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB73_GEMAT
Hypothetical membrane protein {ECO:0000313|EMBL:BAH39479.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
hypothetical protein
13_1_20cm_3_scaffold_1285_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28045..28779)
DNA (735bp) protein (245aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A623_GEMAT
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90124.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC-type transporter, integral membrane subunit
13_1_20cm_3_scaffold_1285_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28822..29706)
DNA (885bp) protein (295aa)
Putative lipid A biosynthesis acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9G0_GEMAT
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AHG90123.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
lipid A biosynthesis acyltransferase
13_1_20cm_3_scaffold_1285_30
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(29771..30703)
DNA (933bp) protein (311aa)
Glycosyl transferase group 1 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S3E1_9CYAN
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY65147.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
group 1 glycosyl transferase
Displaying 30 items

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