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13_1_20cm_3_scaffold_140

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_140_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2..232)
DNA (231bp) protein (77aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE91_CONWI
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADB53583.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
bifunctional deaminase-reductase domain-containing protein
13_1_20cm_3_scaffold_140_2
unknown

Not on your lists

comp(458..571)
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_3_scaffold_140_3
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

987..2231
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I9KJR6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV94483.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
13_1_20cm_3_scaffold_140_4
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2252..3013
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002F36E7B
hypothetical protein Tax=CG_Solirubrobact_01
hypothetical protein
13_1_20cm_3_scaffold_140_5
unknown

Not on your lists

3010..3216
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_3_scaffold_140_trna_1
unknown

Not on your lists

comp(3261..3352)
DNA (92bp)
transferRNA
13_1_20cm_3_scaffold_140_6
unknown

Not on your lists

3384..3647
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_3_scaffold_140_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3848..4330)
DNA (483bp) protein (161aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL95_KORVE
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABF42355.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
phage SPO1 DNA polymerase-related protein
13_1_20cm_3_scaffold_140_8
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4545..5735)
DNA (1191bp) protein (397aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; My
Sensory box histidine kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UM50_MYXSD
sensory box histidine kinase
13_1_20cm_3_scaffold_140_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6013..6996
DNA (984bp) protein (328aa)
cphB; cyanophycinase (EC:3.4.15.6); K13282 cyanophycinase [EC:3.4.15.6] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
cphB; cyanophycinase (EC:3.4.15.6); K13282 cyanophycinase [EC:3.4.15.6] id=14628642 bin=bin8_Chloro species=Aestuariimicrobium kwangyangense genus=Aestuariimicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
cphB; cyanophycinase (EC:3.4.15.6)
13_1_20cm_3_scaffold_140_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7008..9749
DNA (2742bp) protein (914aa)
Cyanophycin synthetase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PNU5_KRIFD
Cyanophycin synthetase {ECO:0000313|EMBL:ADB32763.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / J
cyanophycin synthetase
13_1_20cm_3_scaffold_140_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9780..11486)
DNA (1707bp) protein (569aa)
Mur ligase middle domain-containing protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XX29_9ACTO
Mur ligase middle domain-containing protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Mur ligase middle domain-containing protein
13_1_20cm_3_scaffold_140_12
unknown

Not on your lists

comp(11523..11903)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_3_scaffold_140_13
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11900..12463)
DNA (564bp) protein (188aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CUM4_TRURR
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADI14015.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" so
winged helix family two component transcriptional regulator
13_1_20cm_3_scaffold_140_14
unknown

Not on your lists

comp(12473..12778)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_3_scaffold_140_15
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

12860..13513
DNA (654bp) protein (218aa)
CheB methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] Tax=RBG_16_NC10_65_8_curated
Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WUP3_9NOST
chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
13_1_20cm_3_scaffold_140_16
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13510..15372
DNA (1863bp) protein (621aa)
MCP methyltransferase, CheR-type with PAS/PAC sensor {ECO:0000313|EMBL:ACC79048.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ACC79048.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; N
MCP methyltransferase, CheR-type with PAS/PAC sensor (EC:2.1.1.80)
MCP methyltransferase, CheR-type with PAS/PAC sensor n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J4S6_NOSP7 rbh
13_1_20cm_3_scaffold_140_17
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(15369..16358)
DNA (990bp) protein (330aa)
CheB methylesterase (EC:3.1.1.61)
CheB methylesterase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U3U8_9CYAN
Chemotaxis protein CheB {ECO:0000313|EMBL:KIF19588.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
13_1_20cm_3_scaffold_140_18
GWB1_OP11_45_5_curated, Microgenomates, Bacteria

Not on your lists

16479..16919
DNA (441bp) protein (147aa)
two-component response regulator Tax=GWB1_OP11_45_5_curated
hypothetical protein id=15188907 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
13_1_20cm_3_scaffold_140_19
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

16935..17765
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037434C5 rbh
beta-lactamase-like protein Tax=RBG_16_Chloroflexi_57_11_curated
beta-lactamase domain protein
13_1_20cm_3_scaffold_140_20
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

17846..18640
DNA (795bp) protein (265aa)
PKD domain-containing protein Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
PKD domain containing protein id=2743557 bin=GWF2_OP3_38_59 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
PKD domain-containing protein
13_1_20cm_3_scaffold_140_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18661..19485)
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I8B2_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ41371.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
hypothetical protein
13_1_20cm_3_scaffold_140_22
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19619..20095)
DNA (477bp) protein (159aa)
phosphoribosyltransferase n=1 Tax=Actinomadura flavalba RepID=UPI0003668C94
Purine phosphoribosyltransferase {ECO:0000313|EMBL:AHH96578.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.
purine phosphoribosyltransferase
13_1_20cm_3_scaffold_140_23
unknown

Not on your lists

comp(20444..20659)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_3_scaffold_140_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

20788..21354
DNA (567bp) protein (189aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C981_SPHTD
bifunctional deaminase-reductase domain-containing protein Tax=RBG_16_Chloroflexi_63_12_curated
bifunctional deaminase-reductase domain-containing protein
Displaying 25 items

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