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13_1_20cm_3_scaffold_15137

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_15137_1
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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37..807
DNA (771bp) protein (257aa)
Trehalose 6-phosphatase {ECO:0000313|EMBL:ABA58247.1}; EC=3.1.3.12 {ECO:0000313|EMBL:ABA58247.1};; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nit
Beta-phosphoglucomutase family hydrolase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZY6_NITHN
beta-phosphoglucomutase family hydrolase
13_1_20cm_3_scaffold_15137_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(880..1983)
DNA (1104bp) protein (368aa)
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIL0_9BACT
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) {ECO:0000313|EMBL:EEF60273.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicro
capsule synthesis protein CapA
13_1_20cm_3_scaffold_15137_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2130..2507
DNA (378bp) protein (126aa)
Uncharacterized ACR {ECO:0000313|EMBL:CBH24229.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
hypothetical protein; K09008 hypothetical protein id=24659071 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
13_1_20cm_3_scaffold_15137_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2537..4339)
DNA (1803bp) protein (601aa)
acetate--CoA ligase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
cap:CLDAP_25010 acs; acetate--CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=1245441 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
acs; acetyl-coenzyme A synthetase
13_1_20cm_3_scaffold_15137_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4459..6057
DNA (1599bp) protein (533aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:EDY17357.1}; EC=4.2.1.79 {ECO:0000313|EMBL:EDY17357.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthon
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D803_9BACT
13_1_20cm_3_scaffold_15137_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6184..6903
DNA (720bp) protein (240aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoni
methylisocitrate lyase (EC:2.7.8.23)
Methylisocitrate lyase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D804_9BACT
13_1_20cm_3_scaffold_15137_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6963..7559
DNA (597bp) protein (199aa)
Citrate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D805_9BACT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
citrate synthase 2
13_1_20cm_3_scaffold_15137_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7567..7995
DNA (429bp) protein (143aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D805_9BACT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
13_1_20cm_3_scaffold_15137_9
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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8067..8528
DNA (462bp) protein (154aa)
thioesterase superfamily protein Tax=GWB1_Bdellovibrionales_55_8_curated
Thioesterase superfamily id=3676584 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
thioesterase superfamily protein
13_1_20cm_3_scaffold_15137_10

Not on your lists

8522..8971
DNA (450bp) protein (150aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=77133 species="Bacteria; environmental
beta-lactamase (EC:3.5.2.6)
Beta-lactamase n=2 Tax=Oligotropha carboxidovorans RepID=B6JGD8_OLICO
13_1_20cm_3_scaffold_15137_11

Not on your lists

8952..9344
DNA (393bp) protein (131aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=77133 species="Bacteria; environmental
bla; beta-lactamase Toho-1 (EC:3.5.2.6)
BETA-LACTAMASE n=1 Tax=synthetic construct RepID=UPI0002B63CD3
13_1_20cm_3_scaffold_15137_12
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9392..9895
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI00037694B7
Uncharacterized protein {ECO:0000313|EMBL:CCH27690.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
hypothetical protein
13_1_20cm_3_scaffold_15137_13

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9892..10956
DNA (1065bp) protein (355aa)
gym:GYMC10_0457 methylated-DNA/protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] id=12602 bin=ACD17 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
Uncharacterized protein {ECO:0000313|EMBL:EKE07828.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_15137_trna_1
unknown

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comp(11014..11087)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_15137_14
Streptomyces sp. CNT372, Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(11404..11724)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT372 RepID=UPI00037F9682
13_1_20cm_3_scaffold_15137_15
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11663..12103)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4AD92
SAM dependent carboxyl methyltransferase {ECO:0000313|EMBL:EJJ29019.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase
Displaying 16 items

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